Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm44049-201ENSMUST00000204905 2984 ntBASIC2.22□□□□□ -2.05
Trbv1A0A0B4J1G7 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
Trbv1A0A0B4J1G7 Gm22939-201ENSMUST00000103958 131 ntBASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm14125-201ENSMUST00000113442 680 ntBASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm22486-201ENSMUST00000116815 137 ntBASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm14358-201ENSMUST00000118458 403 ntBASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm14442-201ENSMUST00000119690 1736 ntBASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm23168-201ENSMUST00000157156 143 ntBASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm22792-201ENSMUST00000157225 133 ntBASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm26005-201ENSMUST00000158802 134 ntBASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm29259-201ENSMUST00000186396 694 ntBASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm32340-201ENSMUST00000192883 259 ntBASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm37319-201ENSMUST00000193500 636 ntBASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm25203-202ENSMUST00000200458 216 ntBASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Trav12-4-201ENSMUST00000200663 271 ntBASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm44223-201ENSMUST00000204854 114 ntBASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm44594-201ENSMUST00000208982 407 ntBASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm45614-201ENSMUST00000209994 721 ntBASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm45551-201ENSMUST00000211459 928 ntBASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm19709-201ENSMUST00000215403 482 ntBASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 AC124489.2-201ENSMUST00000223930 589 ntBASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm10038-201ENSMUST00000077233 441 ntBASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm25203-201ENSMUST00000082842 215 ntBASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
Trbv1A0A0B4J1G7 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm13803-201ENSMUST00000117547 489 ntBASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm2066-201ENSMUST00000118046 389 ntBASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm13349-201ENSMUST00000118436 411 ntBASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm15090-201ENSMUST00000118787 1196 ntBASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm12891-201ENSMUST00000119358 240 ntBASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm2318-201ENSMUST00000119623 639 ntBASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm14159-201ENSMUST00000119832 451 ntBASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm14898-201ENSMUST00000120202 645 ntBASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm2005-201ENSMUST00000120759 542 ntBASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm15089-201ENSMUST00000122332 1196 ntBASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm22330-201ENSMUST00000158068 115 ntBASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm20534-201ENSMUST00000172957 172 ntBASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm7438-201ENSMUST00000177664 639 ntBASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm7408-201ENSMUST00000178014 639 ntBASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm7386-201ENSMUST00000178020 639 ntBASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm3657-201ENSMUST00000178170 639 ntBASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm7415-201ENSMUST00000178205 639 ntBASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm7398-201ENSMUST00000178589 639 ntBASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm7391-201ENSMUST00000178680 639 ntBASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm7375-201ENSMUST00000179232 639 ntBASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm3681-201ENSMUST00000179940 639 ntBASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm26991-201ENSMUST00000180950 620 ntBASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm27783-201ENSMUST00000183534 105 ntBASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Mir703-201ENSMUST00000197105 109 ntBASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm43224-201ENSMUST00000201567 898 ntBASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm31849-201ENSMUST00000220306 375 ntBASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 CT009764.1-201ENSMUST00000222260 483 ntBASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 AC159242.1-201ENSMUST00000225832 194 ntBASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 AC140451.2-202ENSMUST00000226156 574 ntBASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Mir499-201ENSMUST00000102357 79 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm22115-201ENSMUST00000103976 133 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm23923-201ENSMUST00000104108 133 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Mir878-201ENSMUST00000104680 78 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm13046-201ENSMUST00000117391 501 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Gm13454-201ENSMUST00000118166 483 ntBASIC2.19□□□□□ -2.06
Trbv1A0A0B4J1G7 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms