Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Gm24757-201ENSMUST00000176987 371 ntBASIC1.69□□□□□ -2.14
Trav9-1A0A075B601 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Trav9-1A0A075B601 Gm27582-201ENSMUST00000184084 126 ntBASIC1.69□□□□□ -2.14
Trav9-1A0A075B601 Mir6916-201ENSMUST00000184514 63 ntBASIC1.69□□□□□ -2.14
Trav9-1A0A075B601 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC1.69□□□□□ -2.14
Trav9-1A0A075B601 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC1.69□□□□□ -2.14
Trav9-1A0A075B601 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC1.69□□□□□ -2.14
Trav9-1A0A075B601 Gm44083-201ENSMUST00000203114 337 ntBASIC1.69□□□□□ -2.14
Trav9-1A0A075B601 Gm31532-201ENSMUST00000203555 767 ntBASIC1.69□□□□□ -2.14
Trav9-1A0A075B601 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC1.69□□□□□ -2.14
Trav9-1A0A075B601 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC1.69□□□□□ -2.14
Trav9-1A0A075B601 AC101984.1-201ENSMUST00000219639 402 ntBASIC1.69□□□□□ -2.14
Trav9-1A0A075B601 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Trav9-1A0A075B601 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC1.69□□□□□ -2.14
Trav9-1A0A075B601 Gm25199-201ENSMUST00000083095 104 ntBASIC1.69□□□□□ -2.14
Trav9-1A0A075B601 Gm42801-201ENSMUST00000202562 2865 ntBASIC1.69□□□□□ -2.14
Trav9-1A0A075B601 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Trav9-1A0A075B601 AC157570.1-201ENSMUST00000218052 3778 ntBASIC1.68□□□□□ -2.14
Trav9-1A0A075B601 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC1.68□□□□□ -2.14
Trav9-1A0A075B601 Gm24120-201ENSMUST00000103978 129 ntBASIC1.68□□□□□ -2.14
Trav9-1A0A075B601 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC1.68□□□□□ -2.14
Trav9-1A0A075B601 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Trav9-1A0A075B601 Gm16383-201ENSMUST00000118122 232 ntBASIC1.68□□□□□ -2.14
Trav9-1A0A075B601 Gm14843-201ENSMUST00000119596 212 ntBASIC1.68□□□□□ -2.14
Trav9-1A0A075B601 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Trav9-1A0A075B601 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Trav9-1A0A075B601 Gm24813-201ENSMUST00000175310 84 ntBASIC1.68□□□□□ -2.14
Trav9-1A0A075B601 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Trav9-1A0A075B601 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Trav9-1A0A075B601 Gm28900-201ENSMUST00000185232 156 ntBASIC1.68□□□□□ -2.14
Trav9-1A0A075B601 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Trav9-1A0A075B601 Gm37037-201ENSMUST00000194475 424 ntBASIC1.68□□□□□ -2.14
Trav9-1A0A075B601 Gm43070-201ENSMUST00000196938 415 ntBASIC1.68□□□□□ -2.14
Trav9-1A0A075B601 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC1.68□□□□□ -2.14
Trav9-1A0A075B601 Gm45445-201ENSMUST00000209586 232 ntBASIC1.68□□□□□ -2.14
Trav9-1A0A075B601 AC153506.2-201ENSMUST00000218051 257 ntBASIC1.68□□□□□ -2.14
Trav9-1A0A075B601 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Trav9-1A0A075B601 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC1.68□□□□□ -2.14
Trav9-1A0A075B601 AC126673.2-201ENSMUST00000221052 686 ntBASIC1.68□□□□□ -2.14
Trav9-1A0A075B601 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Trav9-1A0A075B601 Gm23249-201ENSMUST00000083369 161 ntBASIC1.68□□□□□ -2.14
Trav9-1A0A075B601 Gm25005-201ENSMUST00000083812 156 ntBASIC1.68□□□□□ -2.14
Trav9-1A0A075B601 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Trav9-1A0A075B601 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Trav9-1A0A075B601 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Trav9-1A0A075B601 Gm6207-201ENSMUST00000120075 1386 ntBASIC1.68□□□□□ -2.14
Trav9-1A0A075B601 Gm6228-201ENSMUST00000178856 1386 ntBASIC1.68□□□□□ -2.14
Trav9-1A0A075B601 AC152951.2-201ENSMUST00000218293 3587 ntBASIC1.68□□□□□ -2.14
Trav9-1A0A075B601 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Trav9-1A0A075B601 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Trav9-1A0A075B601 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Trav9-1A0A075B601 Gm15087-201ENSMUST00000117465 1172 ntBASIC1.67□□□□□ -2.14
Trav9-1A0A075B601 Gm12721-201ENSMUST00000120621 268 ntBASIC1.67□□□□□ -2.14
Trav9-1A0A075B601 Gm8080-201ENSMUST00000122046 1155 ntBASIC1.67□□□□□ -2.14
Trav9-1A0A075B601 Gm24546-201ENSMUST00000158652 102 ntBASIC1.67□□□□□ -2.14
Trav9-1A0A075B601 Gm22093-201ENSMUST00000158980 111 ntBASIC1.67□□□□□ -2.14
Trav9-1A0A075B601 Gm8580-201ENSMUST00000160295 464 ntBASIC1.67□□□□□ -2.14
Trav9-1A0A075B601 Gm28637-201ENSMUST00000179424 345 ntBASIC1.67□□□□□ -2.14
Trav9-1A0A075B601 Gm19200-201ENSMUST00000182579 1001 ntBASIC1.67□□□□□ -2.14
Trav9-1A0A075B601 Gm27999-201ENSMUST00000183539 193 ntBASIC1.67□□□□□ -2.14
Trav9-1A0A075B601 Gm21489-201ENSMUST00000189668 818 ntBASIC1.67□□□□□ -2.14
Trav9-1A0A075B601 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC1.67□□□□□ -2.14
Trav9-1A0A075B601 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC1.67□□□□□ -2.14
Trav9-1A0A075B601 Gm43550-201ENSMUST00000200597 303 ntBASIC1.67□□□□□ -2.14
Trav9-1A0A075B601 Gm43368-201ENSMUST00000200638 409 ntBASIC1.67□□□□□ -2.14
Trav9-1A0A075B601 Gm44332-201ENSMUST00000203712 433 ntBASIC1.67□□□□□ -2.14
Trav9-1A0A075B601 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC1.67□□□□□ -2.14
Trav9-1A0A075B601 Gm7753-201ENSMUST00000221007 867 ntBASIC1.67□□□□□ -2.14
Trav9-1A0A075B601 AC167977.1-201ENSMUST00000221384 234 ntBASIC1.67□□□□□ -2.14
Trav9-1A0A075B601 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC1.67□□□□□ -2.14
Trav9-1A0A075B601 AC154562.1-201ENSMUST00000226140 966 ntBASIC1.67□□□□□ -2.14
Trav9-1A0A075B601 AC115291.1-201ENSMUST00000226803 258 ntBASIC1.67□□□□□ -2.14
Trav9-1A0A075B601 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Trav9-1A0A075B601 Snora69-201ENSMUST00000083708 131 ntBASIC1.67□□□□□ -2.14
Trav9-1A0A075B601 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
Trav9-1A0A075B601 Gm10400-201ENSMUST00000203920 3835 ntBASIC1.67□□□□□ -2.14
Trav9-1A0A075B601 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.66□□□□□ -2.14
Trav9-1A0A075B601 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Trav9-1A0A075B601 AC154386.1-201ENSMUST00000222753 2871 ntBASIC1.66□□□□□ -2.14
Trav9-1A0A075B601 AC164164.1-201ENSMUST00000223245 2340 ntBASIC1.66□□□□□ -2.14
Trav9-1A0A075B601 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Trav9-1A0A075B601 AC125374.3-201ENSMUST00000214983 2810 ntBASIC1.66□□□□□ -2.14
Trav9-1A0A075B601 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
Trav9-1A0A075B601 Gm15037-201ENSMUST00000120358 259 ntBASIC1.66□□□□□ -2.14
Trav9-1A0A075B601 Gm12876-201ENSMUST00000120975 408 ntBASIC1.66□□□□□ -2.14
Trav9-1A0A075B601 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
Trav9-1A0A075B601 Gm22225-201ENSMUST00000157358 278 ntBASIC1.66□□□□□ -2.14
Trav9-1A0A075B601 Gm17063-201ENSMUST00000168135 456 ntBASIC1.66□□□□□ -2.14
Trav9-1A0A075B601 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC1.66□□□□□ -2.14
Trav9-1A0A075B601 Gm23190-201ENSMUST00000180307 64 ntBASIC1.66□□□□□ -2.14
Trav9-1A0A075B601 Gm17929-201ENSMUST00000186851 627 ntBASIC1.66□□□□□ -2.14
Trav9-1A0A075B601 Gm28623-201ENSMUST00000187219 192 ntBASIC1.66□□□□□ -2.14
Trav9-1A0A075B601 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC1.66□□□□□ -2.14
Trav9-1A0A075B601 Gm2719-201ENSMUST00000191929 444 ntBASIC1.66□□□□□ -2.14
Trav9-1A0A075B601 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC1.66□□□□□ -2.14
Trav9-1A0A075B601 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC1.66□□□□□ -2.14
Trav9-1A0A075B601 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Trav9-1A0A075B601 Gm42896-201ENSMUST00000201249 1113 ntBASIC1.66□□□□□ -2.14
Trav9-1A0A075B601 Gm44274-201ENSMUST00000203417 256 ntBASIC1.66□□□□□ -2.14
Trav9-1A0A075B601 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC1.66□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms