Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Trav1A0A075B5Z4 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Trav1A0A075B5Z4 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Trav1A0A075B5Z4 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Trav1A0A075B5Z4 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Gm17976-201ENSMUST00000184037 1909 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Gm24118-201ENSMUST00000103972 126 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Gm25764-201ENSMUST00000104092 134 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Gm24671-201ENSMUST00000104159 158 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Gm14835-201ENSMUST00000119039 315 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Gm14887-201ENSMUST00000119522 663 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Gm12723-201ENSMUST00000120700 451 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Gm11260-201ENSMUST00000121163 942 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Gm22956-201ENSMUST00000122520 80 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Gm23213-201ENSMUST00000122715 313 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Gm23212-201ENSMUST00000122718 60 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Gm25666-201ENSMUST00000157702 107 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Mir5123-201ENSMUST00000177794 83 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Gm21893-201ENSMUST00000179119 397 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Gm26297-201ENSMUST00000179464 132 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Snord116l12-201ENSMUST00000179816 94 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Gm27733-201ENSMUST00000184803 68 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Gm28623-201ENSMUST00000187219 192 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Gm28802-201ENSMUST00000188624 944 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Gm43556-201ENSMUST00000196186 681 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Gm44157-201ENSMUST00000204720 410 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Gm44720-201ENSMUST00000206076 260 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Gm45192-201ENSMUST00000206749 283 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Gm44824-201ENSMUST00000207021 229 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 AC162931.1-201ENSMUST00000214184 267 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Gm2446-201ENSMUST00000220144 772 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 AC174082.1-201ENSMUST00000221106 307 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 AC154358.1-201ENSMUST00000224871 218 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 AC160930.1-201ENSMUST00000227194 337 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Gm9845-201ENSMUST00000056409 598 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 AF357341-201ENSMUST00000083088 75 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Gm25792-201ENSMUST00000083289 100 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Gm42870-201ENSMUST00000199355 3470 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 AC167192.3-201ENSMUST00000224096 1567 ntBASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Trav1A0A075B5Z4 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Gm23609-201ENSMUST00000104542 127 ntBASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Gm25563-201ENSMUST00000104603 74 ntBASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 n-R5s52-201ENSMUST00000104614 113 ntBASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Gm12982-201ENSMUST00000117408 190 ntBASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Gm13082-201ENSMUST00000118877 561 ntBASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Gm14359-201ENSMUST00000118883 424 ntBASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Gm15799-201ENSMUST00000120899 289 ntBASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Gm12755-201ENSMUST00000122297 282 ntBASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Gm9498-201ENSMUST00000140849 291 ntBASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Gm22187-201ENSMUST00000157819 129 ntBASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Mir3106-201ENSMUST00000175401 82 ntBASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Gm22584-201ENSMUST00000177935 92 ntBASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Gm11392-201ENSMUST00000181419 710 ntBASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Gm26960-201ENSMUST00000182263 412 ntBASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Mir7028-201ENSMUST00000185016 64 ntBASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Gm28591-201ENSMUST00000185259 183 ntBASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Gm18775-201ENSMUST00000190763 586 ntBASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Gm43489-201ENSMUST00000196810 993 ntBASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Gm34091-201ENSMUST00000200875 604 ntBASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Gm32381-201ENSMUST00000203192 476 ntBASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Gm45048-201ENSMUST00000207058 429 ntBASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 AC116726.2-201ENSMUST00000217629 986 ntBASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Gm25202-201ENSMUST00000082838 191 ntBASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Mir21a-201ENSMUST00000083521 92 ntBASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Gm14910-201ENSMUST00000121037 1805 ntBASIC2.81□□□□□ -1.96
Trav1A0A075B5Z4 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Trav1A0A075B5Z4 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 121.4 ms