Protein–RNA interactions for Protein: Q9Z0H8

Clip2, CAP-Gly domain-containing linker protein 2, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip2Q9Z0H8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clip2Q9Z0H8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Clip2Q9Z0H8 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.02■□□□□ 0.8
Clip2Q9Z0H8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
Clip2Q9Z0H8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clip2Q9Z0H8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Clip2Q9Z0H8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clip2Q9Z0H8 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clip2Q9Z0H8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clip2Q9Z0H8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clip2Q9Z0H8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clip2Q9Z0H8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Clip2Q9Z0H8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clip2Q9Z0H8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clip2Q9Z0H8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.01■□□□□ 0.79
Clip2Q9Z0H8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clip2Q9Z0H8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Clip2Q9Z0H8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clip2Q9Z0H8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clip2Q9Z0H8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clip2Q9Z0H8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Clip2Q9Z0H8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Clip2Q9Z0H8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20■□□□□ 0.79
Clip2Q9Z0H8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Clip2Q9Z0H8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20■□□□□ 0.79
Clip2Q9Z0H8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20■□□□□ 0.79
Clip2Q9Z0H8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clip2Q9Z0H8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Clip2Q9Z0H8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20■□□□□ 0.79
Clip2Q9Z0H8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.99■□□□□ 0.79
Clip2Q9Z0H8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.99■□□□□ 0.79
Clip2Q9Z0H8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clip2Q9Z0H8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.99■□□□□ 0.79
Clip2Q9Z0H8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Clip2Q9Z0H8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clip2Q9Z0H8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Clip2Q9Z0H8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Clip2Q9Z0H8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clip2Q9Z0H8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Clip2Q9Z0H8 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.99■□□□□ 0.79
Clip2Q9Z0H8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Clip2Q9Z0H8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clip2Q9Z0H8 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Clip2Q9Z0H8 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
Clip2Q9Z0H8 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.98■□□□□ 0.79
Clip2Q9Z0H8 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clip2Q9Z0H8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.98■□□□□ 0.79
Clip2Q9Z0H8 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Clip2Q9Z0H8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clip2Q9Z0H8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Clip2Q9Z0H8 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Clip2Q9Z0H8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clip2Q9Z0H8 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Clip2Q9Z0H8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.98■□□□□ 0.79
Clip2Q9Z0H8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.98■□□□□ 0.79
Clip2Q9Z0H8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clip2Q9Z0H8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clip2Q9Z0H8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Clip2Q9Z0H8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clip2Q9Z0H8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clip2Q9Z0H8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clip2Q9Z0H8 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Clip2Q9Z0H8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.97■□□□□ 0.79
Clip2Q9Z0H8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Clip2Q9Z0H8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clip2Q9Z0H8 Gm6659-201ENSMUST00000174752 547 ntBASIC19.97■□□□□ 0.79
Clip2Q9Z0H8 Gm22697-201ENSMUST00000175194 63 ntBASIC19.97■□□□□ 0.79
Clip2Q9Z0H8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Clip2Q9Z0H8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clip2Q9Z0H8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clip2Q9Z0H8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clip2Q9Z0H8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Clip2Q9Z0H8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Clip2Q9Z0H8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.96■□□□□ 0.79
Clip2Q9Z0H8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Clip2Q9Z0H8 Gm10013-201ENSMUST00000106074 672 ntBASIC19.96■□□□□ 0.79
Clip2Q9Z0H8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Clip2Q9Z0H8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clip2Q9Z0H8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.96■□□□□ 0.79
Clip2Q9Z0H8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.96■□□□□ 0.79
Clip2Q9Z0H8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clip2Q9Z0H8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.96■□□□□ 0.79
Clip2Q9Z0H8 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clip2Q9Z0H8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.96■□□□□ 0.79
Clip2Q9Z0H8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.96■□□□□ 0.79
Clip2Q9Z0H8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Clip2Q9Z0H8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Clip2Q9Z0H8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.95■□□□□ 0.78
Clip2Q9Z0H8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clip2Q9Z0H8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Clip2Q9Z0H8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clip2Q9Z0H8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.95■□□□□ 0.78
Clip2Q9Z0H8 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clip2Q9Z0H8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Clip2Q9Z0H8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clip2Q9Z0H8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Clip2Q9Z0H8 Gm8969-201ENSMUST00000199694 526 ntBASIC19.95■□□□□ 0.78
Clip2Q9Z0H8 Gm18101-201ENSMUST00000215769 548 ntBASIC19.95■□□□□ 0.78
Clip2Q9Z0H8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clip2Q9Z0H8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms