Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lhx9Q9WUH2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lhx9Q9WUH2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lhx9Q9WUH2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lhx9Q9WUH2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lhx9Q9WUH2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lhx9Q9WUH2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lhx9Q9WUH2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lhx9Q9WUH2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.36■□□□□ 0.21
Lhx9Q9WUH2 Gm23634-201ENSMUST00000175071 91 ntBASIC16.36■□□□□ 0.21
Lhx9Q9WUH2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Lhx9Q9WUH2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lhx9Q9WUH2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lhx9Q9WUH2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lhx9Q9WUH2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Lhx9Q9WUH2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lhx9Q9WUH2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Lhx9Q9WUH2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lhx9Q9WUH2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lhx9Q9WUH2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Lhx9Q9WUH2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Lhx9Q9WUH2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lhx9Q9WUH2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.35■□□□□ 0.21
Lhx9Q9WUH2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lhx9Q9WUH2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lhx9Q9WUH2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.35■□□□□ 0.21
Lhx9Q9WUH2 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lhx9Q9WUH2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.35■□□□□ 0.21
Lhx9Q9WUH2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lhx9Q9WUH2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lhx9Q9WUH2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lhx9Q9WUH2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx9Q9WUH2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx9Q9WUH2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.34■□□□□ 0.21
Lhx9Q9WUH2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Lhx9Q9WUH2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.34■□□□□ 0.21
Lhx9Q9WUH2 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Lhx9Q9WUH2 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Lhx9Q9WUH2 Gm7367-201ENSMUST00000057611 492 ntBASIC16.34■□□□□ 0.21
Lhx9Q9WUH2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx9Q9WUH2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx9Q9WUH2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx9Q9WUH2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx9Q9WUH2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.34■□□□□ 0.21
Lhx9Q9WUH2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Lhx9Q9WUH2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx9Q9WUH2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx9Q9WUH2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.33■□□□□ 0.21
Lhx9Q9WUH2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
Lhx9Q9WUH2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
Lhx9Q9WUH2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.33■□□□□ 0.21
Lhx9Q9WUH2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Lhx9Q9WUH2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lhx9Q9WUH2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx9Q9WUH2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx9Q9WUH2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx9Q9WUH2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Lhx9Q9WUH2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx9Q9WUH2 Gm7638-201ENSMUST00000121348 967 ntBASIC16.33■□□□□ 0.2
Lhx9Q9WUH2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx9Q9WUH2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Lhx9Q9WUH2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Lhx9Q9WUH2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Lhx9Q9WUH2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx9Q9WUH2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx9Q9WUH2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Lhx9Q9WUH2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx9Q9WUH2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx9Q9WUH2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx9Q9WUH2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx9Q9WUH2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx9Q9WUH2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx9Q9WUH2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx9Q9WUH2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx9Q9WUH2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx9Q9WUH2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx9Q9WUH2 AA414768-201ENSMUST00000121924 1257 ntBASIC16.32■□□□□ 0.2
Lhx9Q9WUH2 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx9Q9WUH2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx9Q9WUH2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx9Q9WUH2 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.32■□□□□ 0.2
Lhx9Q9WUH2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx9Q9WUH2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Lhx9Q9WUH2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx9Q9WUH2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.32■□□□□ 0.2
Lhx9Q9WUH2 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.32■□□□□ 0.2
Lhx9Q9WUH2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx9Q9WUH2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx9Q9WUH2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx9Q9WUH2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx9Q9WUH2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx9Q9WUH2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx9Q9WUH2 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.31■□□□□ 0.2
Lhx9Q9WUH2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx9Q9WUH2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Lhx9Q9WUH2 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx9Q9WUH2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx9Q9WUH2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.31■□□□□ 0.2
Lhx9Q9WUH2 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.31■□□□□ 0.2
Lhx9Q9WUH2 Gm18101-201ENSMUST00000215769 548 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms