Protein–RNA interactions for Protein: Q9JJY3

Smpd3, Sphingomyelin phosphodiesterase 3, mousemouse

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smpd3Q9JJY3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smpd3Q9JJY3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smpd3Q9JJY3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.67■□□□□ 0.26
Smpd3Q9JJY3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smpd3Q9JJY3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smpd3Q9JJY3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smpd3Q9JJY3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Smpd3Q9JJY3 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smpd3Q9JJY3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Smpd3Q9JJY3 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.65■□□□□ 0.26
Smpd3Q9JJY3 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smpd3Q9JJY3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smpd3Q9JJY3 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smpd3Q9JJY3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.65■□□□□ 0.26
Smpd3Q9JJY3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smpd3Q9JJY3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Smpd3Q9JJY3 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smpd3Q9JJY3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Smpd3Q9JJY3 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smpd3Q9JJY3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smpd3Q9JJY3 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.65■□□□□ 0.26
Smpd3Q9JJY3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Smpd3Q9JJY3 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smpd3Q9JJY3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smpd3Q9JJY3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smpd3Q9JJY3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smpd3Q9JJY3 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Smpd3Q9JJY3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Smpd3Q9JJY3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smpd3Q9JJY3 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smpd3Q9JJY3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Smpd3Q9JJY3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smpd3Q9JJY3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.64■□□□□ 0.25
Smpd3Q9JJY3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.64■□□□□ 0.25
Smpd3Q9JJY3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.64■□□□□ 0.25
Smpd3Q9JJY3 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.64■□□□□ 0.25
Smpd3Q9JJY3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smpd3Q9JJY3 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.64■□□□□ 0.25
Smpd3Q9JJY3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smpd3Q9JJY3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smpd3Q9JJY3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Smpd3Q9JJY3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smpd3Q9JJY3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smpd3Q9JJY3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smpd3Q9JJY3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Smpd3Q9JJY3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smpd3Q9JJY3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smpd3Q9JJY3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smpd3Q9JJY3 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smpd3Q9JJY3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smpd3Q9JJY3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smpd3Q9JJY3 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smpd3Q9JJY3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smpd3Q9JJY3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Smpd3Q9JJY3 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smpd3Q9JJY3 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smpd3Q9JJY3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smpd3Q9JJY3 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smpd3Q9JJY3 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smpd3Q9JJY3 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.63■□□□□ 0.25
Smpd3Q9JJY3 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Smpd3Q9JJY3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.63■□□□□ 0.25
Smpd3Q9JJY3 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smpd3Q9JJY3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smpd3Q9JJY3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smpd3Q9JJY3 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smpd3Q9JJY3 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms