Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk3bl1Q9D701 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Upk3bl1Q9D701 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.69■□□□□ 0.1
Upk3bl1Q9D701 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Upk3bl1Q9D701 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk3bl1Q9D701 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk3bl1Q9D701 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk3bl1Q9D701 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk3bl1Q9D701 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk3bl1Q9D701 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk3bl1Q9D701 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk3bl1Q9D701 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Upk3bl1Q9D701 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk3bl1Q9D701 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk3bl1Q9D701 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk3bl1Q9D701 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk3bl1Q9D701 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk3bl1Q9D701 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk3bl1Q9D701 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Upk3bl1Q9D701 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk3bl1Q9D701 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk3bl1Q9D701 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Upk3bl1Q9D701 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk3bl1Q9D701 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.68■□□□□ 0.1
Upk3bl1Q9D701 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Upk3bl1Q9D701 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk3bl1Q9D701 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk3bl1Q9D701 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Upk3bl1Q9D701 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Upk3bl1Q9D701 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Upk3bl1Q9D701 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk3bl1Q9D701 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk3bl1Q9D701 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk3bl1Q9D701 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk3bl1Q9D701 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk3bl1Q9D701 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Upk3bl1Q9D701 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Upk3bl1Q9D701 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk3bl1Q9D701 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk3bl1Q9D701 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk3bl1Q9D701 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Upk3bl1Q9D701 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.67■□□□□ 0.1
Upk3bl1Q9D701 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk3bl1Q9D701 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
Upk3bl1Q9D701 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Upk3bl1Q9D701 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Upk3bl1Q9D701 Gm43173-201ENSMUST00000202246 593 ntBASIC15.67■□□□□ 0.1
Upk3bl1Q9D701 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk3bl1Q9D701 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.67■□□□□ 0.1
Upk3bl1Q9D701 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk3bl1Q9D701 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Upk3bl1Q9D701 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Upk3bl1Q9D701 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk3bl1Q9D701 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk3bl1Q9D701 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk3bl1Q9D701 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk3bl1Q9D701 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk3bl1Q9D701 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk3bl1Q9D701 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Upk3bl1Q9D701 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Upk3bl1Q9D701 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk3bl1Q9D701 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk3bl1Q9D701 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.66■□□□□ 0.1
Upk3bl1Q9D701 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk3bl1Q9D701 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.66■□□□□ 0.1
Upk3bl1Q9D701 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk3bl1Q9D701 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk3bl1Q9D701 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk3bl1Q9D701 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk3bl1Q9D701 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Upk3bl1Q9D701 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk3bl1Q9D701 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Upk3bl1Q9D701 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Upk3bl1Q9D701 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk3bl1Q9D701 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Upk3bl1Q9D701 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk3bl1Q9D701 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Upk3bl1Q9D701 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.65■□□□□ 0.1
Upk3bl1Q9D701 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk3bl1Q9D701 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.65■□□□□ 0.1
Upk3bl1Q9D701 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk3bl1Q9D701 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Upk3bl1Q9D701 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Upk3bl1Q9D701 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk3bl1Q9D701 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk3bl1Q9D701 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.65■□□□□ 0.1
Upk3bl1Q9D701 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Upk3bl1Q9D701 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.65■□□□□ 0.1
Upk3bl1Q9D701 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk3bl1Q9D701 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.65■□□□□ 0.1
Upk3bl1Q9D701 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Upk3bl1Q9D701 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk3bl1Q9D701 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk3bl1Q9D701 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Upk3bl1Q9D701 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Upk3bl1Q9D701 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk3bl1Q9D701 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk3bl1Q9D701 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Upk3bl1Q9D701 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upk3bl1Q9D701 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms