Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rtl8cQ9D6I0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rtl8cQ9D6I0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rtl8cQ9D6I0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rtl8cQ9D6I0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Rtl8cQ9D6I0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rtl8cQ9D6I0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Rtl8cQ9D6I0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rtl8cQ9D6I0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rtl8cQ9D6I0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Rtl8cQ9D6I0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Rtl8cQ9D6I0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rtl8cQ9D6I0 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Rtl8cQ9D6I0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Rtl8cQ9D6I0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.42■□□□□ 0.06
Rtl8cQ9D6I0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rtl8cQ9D6I0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rtl8cQ9D6I0 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rtl8cQ9D6I0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Rtl8cQ9D6I0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rtl8cQ9D6I0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Rtl8cQ9D6I0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rtl8cQ9D6I0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rtl8cQ9D6I0 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rtl8cQ9D6I0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.41■□□□□ 0.06
Rtl8cQ9D6I0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Rtl8cQ9D6I0 Gm43183-201ENSMUST00000200632 547 ntBASIC15.41■□□□□ 0.06
Rtl8cQ9D6I0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rtl8cQ9D6I0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Rtl8cQ9D6I0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rtl8cQ9D6I0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rtl8cQ9D6I0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rtl8cQ9D6I0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
Rtl8cQ9D6I0 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rtl8cQ9D6I0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rtl8cQ9D6I0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rtl8cQ9D6I0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rtl8cQ9D6I0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rtl8cQ9D6I0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rtl8cQ9D6I0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rtl8cQ9D6I0 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rtl8cQ9D6I0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rtl8cQ9D6I0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rtl8cQ9D6I0 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Rtl8cQ9D6I0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtl8cQ9D6I0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rtl8cQ9D6I0 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Rtl8cQ9D6I0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Rtl8cQ9D6I0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.4■□□□□ 0.06
Rtl8cQ9D6I0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rtl8cQ9D6I0 Gm10517-202ENSMUST00000192970 758 ntBASIC15.4■□□□□ 0.06
Rtl8cQ9D6I0 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.4■□□□□ 0.06
Rtl8cQ9D6I0 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.4■□□□□ 0.06
Rtl8cQ9D6I0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtl8cQ9D6I0 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtl8cQ9D6I0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtl8cQ9D6I0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtl8cQ9D6I0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtl8cQ9D6I0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rtl8cQ9D6I0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.39■□□□□ 0.06
Rtl8cQ9D6I0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.39■□□□□ 0.05
Rtl8cQ9D6I0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.39■□□□□ 0.05
Rtl8cQ9D6I0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rtl8cQ9D6I0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtl8cQ9D6I0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtl8cQ9D6I0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.39■□□□□ 0.05
Rtl8cQ9D6I0 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rtl8cQ9D6I0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtl8cQ9D6I0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rtl8cQ9D6I0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.39■□□□□ 0.05
Rtl8cQ9D6I0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtl8cQ9D6I0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rtl8cQ9D6I0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Rtl8cQ9D6I0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtl8cQ9D6I0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Rtl8cQ9D6I0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rtl8cQ9D6I0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtl8cQ9D6I0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtl8cQ9D6I0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rtl8cQ9D6I0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rtl8cQ9D6I0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.38■□□□□ 0.05
Rtl8cQ9D6I0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Rtl8cQ9D6I0 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtl8cQ9D6I0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtl8cQ9D6I0 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rtl8cQ9D6I0 Gm37025-201ENSMUST00000195159 829 ntBASIC15.38■□□□□ 0.05
Rtl8cQ9D6I0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Rtl8cQ9D6I0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtl8cQ9D6I0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtl8cQ9D6I0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtl8cQ9D6I0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rtl8cQ9D6I0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtl8cQ9D6I0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rtl8cQ9D6I0 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtl8cQ9D6I0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtl8cQ9D6I0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtl8cQ9D6I0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtl8cQ9D6I0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Rtl8cQ9D6I0 Gm24841-201ENSMUST00000158676 357 ntBASIC15.37■□□□□ 0.05
Rtl8cQ9D6I0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms