Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3404Q9D506 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.29■□□□□ 0.52
Gm3404Q9D506 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Gm3404Q9D506 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.29■□□□□ 0.52
Gm3404Q9D506 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3404Q9D506 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3404Q9D506 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3404Q9D506 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3404Q9D506 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3404Q9D506 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3404Q9D506 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3404Q9D506 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3404Q9D506 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Gm3404Q9D506 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3404Q9D506 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3404Q9D506 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Gm3404Q9D506 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Gm3404Q9D506 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3404Q9D506 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.28■□□□□ 0.52
Gm3404Q9D506 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.28■□□□□ 0.52
Gm3404Q9D506 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3404Q9D506 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3404Q9D506 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3404Q9D506 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3404Q9D506 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3404Q9D506 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3404Q9D506 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3404Q9D506 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Gm3404Q9D506 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3404Q9D506 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Gm3404Q9D506 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.27■□□□□ 0.52
Gm3404Q9D506 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3404Q9D506 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.27■□□□□ 0.52
Gm3404Q9D506 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3404Q9D506 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Gm3404Q9D506 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.27■□□□□ 0.52
Gm3404Q9D506 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3404Q9D506 Gm38027-201ENSMUST00000192315 235 ntBASIC18.27■□□□□ 0.52
Gm3404Q9D506 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3404Q9D506 Gm3375-201ENSMUST00000203929 796 ntBASIC18.27■□□□□ 0.52
Gm3404Q9D506 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.27■□□□□ 0.52
Gm3404Q9D506 Odf3b-204ENSMUST00000227834 930 ntBASIC18.27■□□□□ 0.52
Gm3404Q9D506 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3404Q9D506 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm3404Q9D506 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm3404Q9D506 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.27■□□□□ 0.51
Gm3404Q9D506 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3404Q9D506 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3404Q9D506 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3404Q9D506 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Gm3404Q9D506 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3404Q9D506 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3404Q9D506 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3404Q9D506 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.26■□□□□ 0.51
Gm3404Q9D506 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3404Q9D506 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3404Q9D506 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3404Q9D506 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3404Q9D506 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3404Q9D506 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3404Q9D506 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Gm3404Q9D506 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3404Q9D506 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3404Q9D506 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Gm3404Q9D506 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3404Q9D506 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3404Q9D506 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Gm3404Q9D506 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3404Q9D506 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Gm3404Q9D506 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3404Q9D506 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Gm3404Q9D506 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3404Q9D506 Gm21814-202ENSMUST00000203277 873 ntBASIC18.25■□□□□ 0.51
Gm3404Q9D506 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.25■□□□□ 0.51
Gm3404Q9D506 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.25■□□□□ 0.51
Gm3404Q9D506 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3404Q9D506 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Gm3404Q9D506 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3404Q9D506 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.25■□□□□ 0.51
Gm3404Q9D506 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3404Q9D506 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3404Q9D506 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3404Q9D506 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Gm3404Q9D506 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Gm3404Q9D506 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3404Q9D506 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.24■□□□□ 0.51
Gm3404Q9D506 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3404Q9D506 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.24■□□□□ 0.51
Gm3404Q9D506 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3404Q9D506 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3404Q9D506 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3404Q9D506 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.24■□□□□ 0.51
Gm3404Q9D506 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3404Q9D506 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.24■□□□□ 0.51
Gm3404Q9D506 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Gm3404Q9D506 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.24■□□□□ 0.51
Gm3404Q9D506 Gm8969-201ENSMUST00000199694 526 ntBASIC18.24■□□□□ 0.51
Gm3404Q9D506 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3404Q9D506 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.24■□□□□ 0.51
Gm3404Q9D506 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms