Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.07■□□□□ 0.48
Ddx56Q9D0R4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx56Q9D0R4 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx56Q9D0R4 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx56Q9D0R4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx56Q9D0R4 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx56Q9D0R4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx56Q9D0R4 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.07■□□□□ 0.48
Ddx56Q9D0R4 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx56Q9D0R4 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.07■□□□□ 0.48
Ddx56Q9D0R4 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.07■□□□□ 0.48
Ddx56Q9D0R4 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx56Q9D0R4 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Ddx56Q9D0R4 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.07■□□□□ 0.48
Ddx56Q9D0R4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx56Q9D0R4 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Ddx56Q9D0R4 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx56Q9D0R4 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx56Q9D0R4 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx56Q9D0R4 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Ddx56Q9D0R4 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx56Q9D0R4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Ddx56Q9D0R4 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx56Q9D0R4 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ddx56Q9D0R4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx56Q9D0R4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx56Q9D0R4 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Ddx56Q9D0R4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx56Q9D0R4 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx56Q9D0R4 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ddx56Q9D0R4 Gm12085-201ENSMUST00000119263 940 ntBASIC18.06■□□□□ 0.48
Ddx56Q9D0R4 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Ddx56Q9D0R4 Gm37025-201ENSMUST00000195159 829 ntBASIC18.06■□□□□ 0.48
Ddx56Q9D0R4 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.06■□□□□ 0.48
Ddx56Q9D0R4 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.06■□□□□ 0.48
Ddx56Q9D0R4 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx56Q9D0R4 Gm10812-201ENSMUST00000099864 546 ntBASIC18.06■□□□□ 0.48
Ddx56Q9D0R4 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx56Q9D0R4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx56Q9D0R4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.06■□□□□ 0.48
Ddx56Q9D0R4 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx56Q9D0R4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Ddx56Q9D0R4 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx56Q9D0R4 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx56Q9D0R4 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx56Q9D0R4 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx56Q9D0R4 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx56Q9D0R4 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.05■□□□□ 0.48
Ddx56Q9D0R4 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.05■□□□□ 0.48
Ddx56Q9D0R4 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx56Q9D0R4 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx56Q9D0R4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx56Q9D0R4 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx56Q9D0R4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx56Q9D0R4 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx56Q9D0R4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.04■□□□□ 0.48
Ddx56Q9D0R4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx56Q9D0R4 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Ddx56Q9D0R4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx56Q9D0R4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx56Q9D0R4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx56Q9D0R4 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.04■□□□□ 0.48
Ddx56Q9D0R4 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx56Q9D0R4 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx56Q9D0R4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx56Q9D0R4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx56Q9D0R4 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx56Q9D0R4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx56Q9D0R4 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Ddx56Q9D0R4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx56Q9D0R4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.03■□□□□ 0.48
Ddx56Q9D0R4 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx56Q9D0R4 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx56Q9D0R4 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx56Q9D0R4 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.03■□□□□ 0.48
Ddx56Q9D0R4 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx56Q9D0R4 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx56Q9D0R4 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx56Q9D0R4 Gm17661-201ENSMUST00000170317 270 ntBASIC18.03■□□□□ 0.48
Ddx56Q9D0R4 Gm38027-201ENSMUST00000192315 235 ntBASIC18.03■□□□□ 0.48
Ddx56Q9D0R4 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.03■□□□□ 0.48
Ddx56Q9D0R4 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx56Q9D0R4 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ddx56Q9D0R4 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.03■□□□□ 0.48
Ddx56Q9D0R4 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx56Q9D0R4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx56Q9D0R4 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx56Q9D0R4 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx56Q9D0R4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx56Q9D0R4 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx56Q9D0R4 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Ddx56Q9D0R4 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Ddx56Q9D0R4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Ddx56Q9D0R4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx56Q9D0R4 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx56Q9D0R4 Gm715-201ENSMUST00000117865 831 ntBASIC18.02■□□□□ 0.48
Ddx56Q9D0R4 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.02■□□□□ 0.48
Ddx56Q9D0R4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx56Q9D0R4 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx56Q9D0R4 Timm23-208ENSMUST00000226683 750 ntBASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms