Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chaf1bQ9D0N7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chaf1bQ9D0N7 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.25■□□□□ 0.19
Chaf1bQ9D0N7 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Chaf1bQ9D0N7 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Chaf1bQ9D0N7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chaf1bQ9D0N7 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chaf1bQ9D0N7 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chaf1bQ9D0N7 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chaf1bQ9D0N7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Chaf1bQ9D0N7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chaf1bQ9D0N7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chaf1bQ9D0N7 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chaf1bQ9D0N7 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.24■□□□□ 0.19
Chaf1bQ9D0N7 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chaf1bQ9D0N7 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chaf1bQ9D0N7 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chaf1bQ9D0N7 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chaf1bQ9D0N7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.23■□□□□ 0.19
Chaf1bQ9D0N7 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.23■□□□□ 0.19
Chaf1bQ9D0N7 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chaf1bQ9D0N7 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chaf1bQ9D0N7 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chaf1bQ9D0N7 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chaf1bQ9D0N7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chaf1bQ9D0N7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Chaf1bQ9D0N7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Chaf1bQ9D0N7 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chaf1bQ9D0N7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.23■□□□□ 0.19
Chaf1bQ9D0N7 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chaf1bQ9D0N7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Chaf1bQ9D0N7 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chaf1bQ9D0N7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chaf1bQ9D0N7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chaf1bQ9D0N7 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chaf1bQ9D0N7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.23■□□□□ 0.19
Chaf1bQ9D0N7 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Chaf1bQ9D0N7 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.23■□□□□ 0.19
Chaf1bQ9D0N7 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chaf1bQ9D0N7 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chaf1bQ9D0N7 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chaf1bQ9D0N7 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chaf1bQ9D0N7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chaf1bQ9D0N7 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Chaf1bQ9D0N7 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Chaf1bQ9D0N7 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Chaf1bQ9D0N7 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Chaf1bQ9D0N7 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chaf1bQ9D0N7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.22■□□□□ 0.19
Chaf1bQ9D0N7 Gm7514-201ENSMUST00000209475 934 ntBASIC16.22■□□□□ 0.19
Chaf1bQ9D0N7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chaf1bQ9D0N7 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chaf1bQ9D0N7 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chaf1bQ9D0N7 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chaf1bQ9D0N7 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chaf1bQ9D0N7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chaf1bQ9D0N7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chaf1bQ9D0N7 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chaf1bQ9D0N7 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chaf1bQ9D0N7 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chaf1bQ9D0N7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chaf1bQ9D0N7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chaf1bQ9D0N7 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.22■□□□□ 0.19
Chaf1bQ9D0N7 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chaf1bQ9D0N7 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chaf1bQ9D0N7 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chaf1bQ9D0N7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chaf1bQ9D0N7 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chaf1bQ9D0N7 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chaf1bQ9D0N7 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chaf1bQ9D0N7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chaf1bQ9D0N7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.21■□□□□ 0.19
Chaf1bQ9D0N7 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.21■□□□□ 0.18
Chaf1bQ9D0N7 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Chaf1bQ9D0N7 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Chaf1bQ9D0N7 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chaf1bQ9D0N7 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chaf1bQ9D0N7 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chaf1bQ9D0N7 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chaf1bQ9D0N7 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Chaf1bQ9D0N7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chaf1bQ9D0N7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.2■□□□□ 0.18
Chaf1bQ9D0N7 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chaf1bQ9D0N7 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chaf1bQ9D0N7 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chaf1bQ9D0N7 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Chaf1bQ9D0N7 Haglr-201ENSMUST00000100000 2085 ntBASIC16.2■□□□□ 0.18
Chaf1bQ9D0N7 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.2■□□□□ 0.18
Chaf1bQ9D0N7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chaf1bQ9D0N7 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chaf1bQ9D0N7 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chaf1bQ9D0N7 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chaf1bQ9D0N7 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chaf1bQ9D0N7 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Chaf1bQ9D0N7 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chaf1bQ9D0N7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.19■□□□□ 0.18
Chaf1bQ9D0N7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.19■□□□□ 0.18
Chaf1bQ9D0N7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chaf1bQ9D0N7 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.19■□□□□ 0.18
Chaf1bQ9D0N7 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms