Protein–RNA interactions for Protein: Q9CTH6

Fcf1, rRNA-processing protein FCF1 homolog, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fcf1Q9CTH6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fcf1Q9CTH6 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Fcf1Q9CTH6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fcf1Q9CTH6 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Fcf1Q9CTH6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Fcf1Q9CTH6 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Fcf1Q9CTH6 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.33■□□□□ 0.37
Fcf1Q9CTH6 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Fcf1Q9CTH6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Fcf1Q9CTH6 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Fcf1Q9CTH6 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Fcf1Q9CTH6 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fcf1Q9CTH6 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Fcf1Q9CTH6 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fcf1Q9CTH6 Il3ra-202ENSMUST00000223589 738 ntBASIC17.33■□□□□ 0.36
Fcf1Q9CTH6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Fcf1Q9CTH6 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fcf1Q9CTH6 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Fcf1Q9CTH6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fcf1Q9CTH6 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fcf1Q9CTH6 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Fcf1Q9CTH6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Fcf1Q9CTH6 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Fcf1Q9CTH6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fcf1Q9CTH6 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fcf1Q9CTH6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fcf1Q9CTH6 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fcf1Q9CTH6 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fcf1Q9CTH6 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fcf1Q9CTH6 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fcf1Q9CTH6 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Fcf1Q9CTH6 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fcf1Q9CTH6 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Fcf1Q9CTH6 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fcf1Q9CTH6 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fcf1Q9CTH6 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fcf1Q9CTH6 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Fcf1Q9CTH6 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Fcf1Q9CTH6 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fcf1Q9CTH6 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fcf1Q9CTH6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Fcf1Q9CTH6 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fcf1Q9CTH6 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fcf1Q9CTH6 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fcf1Q9CTH6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fcf1Q9CTH6 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fcf1Q9CTH6 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fcf1Q9CTH6 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fcf1Q9CTH6 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Fcf1Q9CTH6 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fcf1Q9CTH6 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fcf1Q9CTH6 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fcf1Q9CTH6 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fcf1Q9CTH6 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fcf1Q9CTH6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fcf1Q9CTH6 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fcf1Q9CTH6 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fcf1Q9CTH6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fcf1Q9CTH6 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Fcf1Q9CTH6 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Fcf1Q9CTH6 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fcf1Q9CTH6 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fcf1Q9CTH6 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.3■□□□□ 0.36
Fcf1Q9CTH6 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Fcf1Q9CTH6 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Fcf1Q9CTH6 Mir5130-201ENSMUST00000175160 84 ntBASIC17.3■□□□□ 0.36
Fcf1Q9CTH6 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.3■□□□□ 0.36
Fcf1Q9CTH6 Gm45058-201ENSMUST00000205810 766 ntBASIC17.3■□□□□ 0.36
Fcf1Q9CTH6 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Fcf1Q9CTH6 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fcf1Q9CTH6 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fcf1Q9CTH6 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fcf1Q9CTH6 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.3■□□□□ 0.36
Fcf1Q9CTH6 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fcf1Q9CTH6 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fcf1Q9CTH6 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Fcf1Q9CTH6 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fcf1Q9CTH6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Fcf1Q9CTH6 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fcf1Q9CTH6 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Fcf1Q9CTH6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fcf1Q9CTH6 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fcf1Q9CTH6 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fcf1Q9CTH6 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Fcf1Q9CTH6 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Fcf1Q9CTH6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.29■□□□□ 0.36
Fcf1Q9CTH6 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Fcf1Q9CTH6 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fcf1Q9CTH6 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fcf1Q9CTH6 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fcf1Q9CTH6 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fcf1Q9CTH6 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Fcf1Q9CTH6 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Fcf1Q9CTH6 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Fcf1Q9CTH6 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fcf1Q9CTH6 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fcf1Q9CTH6 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fcf1Q9CTH6 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.28■□□□□ 0.36
Fcf1Q9CTH6 Gm8969-201ENSMUST00000199694 526 ntBASIC17.28■□□□□ 0.36
Fcf1Q9CTH6 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms