Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.06□□□□□ -0.16
RTRAFQ9CQE8 Gm45102-201ENSMUST00000207427 857 ntBASIC14.06□□□□□ -0.16
RTRAFQ9CQE8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.06□□□□□ -0.16
RTRAFQ9CQE8 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTRAFQ9CQE8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTRAFQ9CQE8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTRAFQ9CQE8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
RTRAFQ9CQE8 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTRAFQ9CQE8 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RTRAFQ9CQE8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.06□□□□□ -0.16
RTRAFQ9CQE8 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RTRAFQ9CQE8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RTRAFQ9CQE8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RTRAFQ9CQE8 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RTRAFQ9CQE8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RTRAFQ9CQE8 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTRAFQ9CQE8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RTRAFQ9CQE8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTRAFQ9CQE8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.05□□□□□ -0.16
RTRAFQ9CQE8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTRAFQ9CQE8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTRAFQ9CQE8 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTRAFQ9CQE8 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RTRAFQ9CQE8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTRAFQ9CQE8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTRAFQ9CQE8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RTRAFQ9CQE8 Smad6-203ENSMUST00000179458 273 ntBASIC14.05□□□□□ -0.16
RTRAFQ9CQE8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RTRAFQ9CQE8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RTRAFQ9CQE8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTRAFQ9CQE8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.05□□□□□ -0.16
RTRAFQ9CQE8 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTRAFQ9CQE8 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RTRAFQ9CQE8 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTRAFQ9CQE8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTRAFQ9CQE8 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.05□□□□□ -0.16
RTRAFQ9CQE8 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTRAFQ9CQE8 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RTRAFQ9CQE8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RTRAFQ9CQE8 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTRAFQ9CQE8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RTRAFQ9CQE8 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTRAFQ9CQE8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTRAFQ9CQE8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RTRAFQ9CQE8 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTRAFQ9CQE8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.04□□□□□ -0.16
RTRAFQ9CQE8 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
RTRAFQ9CQE8 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.04□□□□□ -0.16
RTRAFQ9CQE8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RTRAFQ9CQE8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RTRAFQ9CQE8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RTRAFQ9CQE8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RTRAFQ9CQE8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RTRAFQ9CQE8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTRAFQ9CQE8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTRAFQ9CQE8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.04□□□□□ -0.16
RTRAFQ9CQE8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTRAFQ9CQE8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RTRAFQ9CQE8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTRAFQ9CQE8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTRAFQ9CQE8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTRAFQ9CQE8 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.04□□□□□ -0.16
RTRAFQ9CQE8 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTRAFQ9CQE8 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RTRAFQ9CQE8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
RTRAFQ9CQE8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RTRAFQ9CQE8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RTRAFQ9CQE8 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTRAFQ9CQE8 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTRAFQ9CQE8 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTRAFQ9CQE8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTRAFQ9CQE8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.03□□□□□ -0.16
RTRAFQ9CQE8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTRAFQ9CQE8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTRAFQ9CQE8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTRAFQ9CQE8 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
RTRAFQ9CQE8 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RTRAFQ9CQE8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RTRAFQ9CQE8 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RTRAFQ9CQE8 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTRAFQ9CQE8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTRAFQ9CQE8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RTRAFQ9CQE8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTRAFQ9CQE8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RTRAFQ9CQE8 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTRAFQ9CQE8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTRAFQ9CQE8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.03□□□□□ -0.16
RTRAFQ9CQE8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RTRAFQ9CQE8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTRAFQ9CQE8 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTRAFQ9CQE8 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RTRAFQ9CQE8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RTRAFQ9CQE8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
RTRAFQ9CQE8 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RTRAFQ9CQE8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RTRAFQ9CQE8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RTRAFQ9CQE8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RTRAFQ9CQE8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RTRAFQ9CQE8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RTRAFQ9CQE8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms