Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Trim16Q99PP9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim16Q99PP9 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.83■□□□□ 0.28
Trim16Q99PP9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim16Q99PP9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Trim16Q99PP9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trim16Q99PP9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim16Q99PP9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim16Q99PP9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim16Q99PP9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trim16Q99PP9 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.82■□□□□ 0.28
Trim16Q99PP9 Mir2861-201ENSMUST00000175539 82 ntBASIC16.82■□□□□ 0.28
Trim16Q99PP9 Gm8520-201ENSMUST00000186517 868 ntBASIC16.82■□□□□ 0.28
Trim16Q99PP9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.82■□□□□ 0.28
Trim16Q99PP9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim16Q99PP9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.82■□□□□ 0.28
Trim16Q99PP9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim16Q99PP9 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim16Q99PP9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim16Q99PP9 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim16Q99PP9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.81■□□□□ 0.28
Trim16Q99PP9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim16Q99PP9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim16Q99PP9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim16Q99PP9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.81■□□□□ 0.28
Trim16Q99PP9 Gm15375-201ENSMUST00000119510 849 ntBASIC16.81■□□□□ 0.28
Trim16Q99PP9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.81■□□□□ 0.28
Trim16Q99PP9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim16Q99PP9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.81■□□□□ 0.28
Trim16Q99PP9 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.81■□□□□ 0.28
Trim16Q99PP9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim16Q99PP9 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.81■□□□□ 0.28
Trim16Q99PP9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim16Q99PP9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim16Q99PP9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim16Q99PP9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim16Q99PP9 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim16Q99PP9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim16Q99PP9 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim16Q99PP9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim16Q99PP9 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.8■□□□□ 0.28
Trim16Q99PP9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Trim16Q99PP9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim16Q99PP9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim16Q99PP9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim16Q99PP9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim16Q99PP9 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim16Q99PP9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim16Q99PP9 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim16Q99PP9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim16Q99PP9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim16Q99PP9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.8■□□□□ 0.28
Trim16Q99PP9 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.8■□□□□ 0.28
Trim16Q99PP9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim16Q99PP9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim16Q99PP9 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim16Q99PP9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim16Q99PP9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.8■□□□□ 0.28
Trim16Q99PP9 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trim16Q99PP9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim16Q99PP9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.8■□□□□ 0.28
Trim16Q99PP9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim16Q99PP9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.8■□□□□ 0.28
Trim16Q99PP9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim16Q99PP9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim16Q99PP9 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trim16Q99PP9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.79■□□□□ 0.28
Trim16Q99PP9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim16Q99PP9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim16Q99PP9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim16Q99PP9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trim16Q99PP9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.79■□□□□ 0.28
Trim16Q99PP9 Mir6349-201ENSMUST00000184059 97 ntBASIC16.79■□□□□ 0.28
Trim16Q99PP9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.79■□□□□ 0.28
Trim16Q99PP9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.79■□□□□ 0.28
Trim16Q99PP9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim16Q99PP9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim16Q99PP9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Trim16Q99PP9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Trim16Q99PP9 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.79■□□□□ 0.28
Trim16Q99PP9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim16Q99PP9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim16Q99PP9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim16Q99PP9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim16Q99PP9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim16Q99PP9 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim16Q99PP9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim16Q99PP9 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim16Q99PP9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim16Q99PP9 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim16Q99PP9 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim16Q99PP9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim16Q99PP9 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim16Q99PP9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Trim16Q99PP9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.78■□□□□ 0.28
Trim16Q99PP9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.78■□□□□ 0.28
Trim16Q99PP9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trim16Q99PP9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim16Q99PP9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim16Q99PP9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms