Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim8Q99PJ2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trim8Q99PJ2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.88■□□□□ 0.29
Trim8Q99PJ2 Gm13401-201ENSMUST00000117074 291 ntBASIC16.88■□□□□ 0.29
Trim8Q99PJ2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim8Q99PJ2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trim8Q99PJ2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.88■□□□□ 0.29
Trim8Q99PJ2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.88■□□□□ 0.29
Trim8Q99PJ2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim8Q99PJ2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim8Q99PJ2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim8Q99PJ2 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim8Q99PJ2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim8Q99PJ2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim8Q99PJ2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trim8Q99PJ2 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim8Q99PJ2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim8Q99PJ2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim8Q99PJ2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim8Q99PJ2 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim8Q99PJ2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim8Q99PJ2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim8Q99PJ2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim8Q99PJ2 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim8Q99PJ2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trim8Q99PJ2 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim8Q99PJ2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim8Q99PJ2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trim8Q99PJ2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim8Q99PJ2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim8Q99PJ2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim8Q99PJ2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim8Q99PJ2 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim8Q99PJ2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.87■□□□□ 0.29
Trim8Q99PJ2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.87■□□□□ 0.29
Trim8Q99PJ2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim8Q99PJ2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim8Q99PJ2 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim8Q99PJ2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim8Q99PJ2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim8Q99PJ2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.87■□□□□ 0.29
Trim8Q99PJ2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim8Q99PJ2 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim8Q99PJ2 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim8Q99PJ2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim8Q99PJ2 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim8Q99PJ2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim8Q99PJ2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim8Q99PJ2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim8Q99PJ2 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim8Q99PJ2 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.86■□□□□ 0.29
Trim8Q99PJ2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Trim8Q99PJ2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim8Q99PJ2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Trim8Q99PJ2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.86■□□□□ 0.29
Trim8Q99PJ2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trim8Q99PJ2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trim8Q99PJ2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim8Q99PJ2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.86■□□□□ 0.29
Trim8Q99PJ2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Trim8Q99PJ2 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim8Q99PJ2 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim8Q99PJ2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim8Q99PJ2 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim8Q99PJ2 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Trim8Q99PJ2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim8Q99PJ2 Gm13148-201ENSMUST00000118892 745 ntBASIC16.85■□□□□ 0.29
Trim8Q99PJ2 Mir2861-201ENSMUST00000175539 82 ntBASIC16.85■□□□□ 0.29
Trim8Q99PJ2 Gm44549-201ENSMUST00000208351 577 ntBASIC16.85■□□□□ 0.29
Trim8Q99PJ2 Mtag2-201ENSMUST00000058665 714 ntBASIC16.85■□□□□ 0.29
Trim8Q99PJ2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim8Q99PJ2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trim8Q99PJ2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim8Q99PJ2 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim8Q99PJ2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim8Q99PJ2 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim8Q99PJ2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim8Q99PJ2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim8Q99PJ2 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.84■□□□□ 0.29
Trim8Q99PJ2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim8Q99PJ2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trim8Q99PJ2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim8Q99PJ2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim8Q99PJ2 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.84■□□□□ 0.29
Trim8Q99PJ2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trim8Q99PJ2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim8Q99PJ2 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim8Q99PJ2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim8Q99PJ2 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim8Q99PJ2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim8Q99PJ2 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim8Q99PJ2 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim8Q99PJ2 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim8Q99PJ2 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim8Q99PJ2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Trim8Q99PJ2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim8Q99PJ2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Trim8Q99PJ2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim8Q99PJ2 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim8Q99PJ2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms