Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh23Q99PF4 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh23Q99PF4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh23Q99PF4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh23Q99PF4 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh23Q99PF4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh23Q99PF4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh23Q99PF4 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.59■□□□□ 0.41
Cdh23Q99PF4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh23Q99PF4 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh23Q99PF4 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh23Q99PF4 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Cdh23Q99PF4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.59■□□□□ 0.41
Cdh23Q99PF4 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cdh23Q99PF4 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.59■□□□□ 0.41
Cdh23Q99PF4 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.59■□□□□ 0.41
Cdh23Q99PF4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdh23Q99PF4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdh23Q99PF4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdh23Q99PF4 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.58■□□□□ 0.41
Cdh23Q99PF4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.58■□□□□ 0.4
Cdh23Q99PF4 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdh23Q99PF4 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Cdh23Q99PF4 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdh23Q99PF4 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.58■□□□□ 0.4
Cdh23Q99PF4 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdh23Q99PF4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdh23Q99PF4 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh23Q99PF4 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.57■□□□□ 0.4
Cdh23Q99PF4 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh23Q99PF4 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh23Q99PF4 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.57■□□□□ 0.4
Cdh23Q99PF4 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cdh23Q99PF4 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh23Q99PF4 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh23Q99PF4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh23Q99PF4 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh23Q99PF4 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh23Q99PF4 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh23Q99PF4 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh23Q99PF4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh23Q99PF4 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.56■□□□□ 0.4
Cdh23Q99PF4 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh23Q99PF4 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.56■□□□□ 0.4
Cdh23Q99PF4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh23Q99PF4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh23Q99PF4 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh23Q99PF4 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.56■□□□□ 0.4
Cdh23Q99PF4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh23Q99PF4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh23Q99PF4 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.56■□□□□ 0.4
Cdh23Q99PF4 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh23Q99PF4 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh23Q99PF4 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh23Q99PF4 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.56■□□□□ 0.4
Cdh23Q99PF4 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh23Q99PF4 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh23Q99PF4 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh23Q99PF4 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh23Q99PF4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh23Q99PF4 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh23Q99PF4 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh23Q99PF4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh23Q99PF4 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh23Q99PF4 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh23Q99PF4 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cdh23Q99PF4 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cdh23Q99PF4 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh23Q99PF4 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cdh23Q99PF4 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh23Q99PF4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh23Q99PF4 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh23Q99PF4 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh23Q99PF4 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh23Q99PF4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh23Q99PF4 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh23Q99PF4 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.54■□□□□ 0.4
Cdh23Q99PF4 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh23Q99PF4 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.54■□□□□ 0.4
Cdh23Q99PF4 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
Cdh23Q99PF4 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.54■□□□□ 0.4
Cdh23Q99PF4 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh23Q99PF4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh23Q99PF4 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Cdh23Q99PF4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh23Q99PF4 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh23Q99PF4 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh23Q99PF4 Gm6296-201ENSMUST00000222599 943 ntBASIC17.53■□□□□ 0.4
Cdh23Q99PF4 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh23Q99PF4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh23Q99PF4 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cdh23Q99PF4 Gm9727-201ENSMUST00000161387 555 ntBASIC17.53■□□□□ 0.4
Cdh23Q99PF4 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.53■□□□□ 0.4
Cdh23Q99PF4 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.53■□□□□ 0.4
Cdh23Q99PF4 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh23Q99PF4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh23Q99PF4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh23Q99PF4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh23Q99PF4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.53■□□□□ 0.4
Cdh23Q99PF4 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms