Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf2ird2Q99NI3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf2ird2Q99NI3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf2ird2Q99NI3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf2ird2Q99NI3 Gm7889-201ENSMUST00000185591 958 ntBASIC17.7■□□□□ 0.42
Gtf2ird2Q99NI3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf2ird2Q99NI3 Gm9731-201ENSMUST00000209480 747 ntBASIC17.7■□□□□ 0.42
Gtf2ird2Q99NI3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf2ird2Q99NI3 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf2ird2Q99NI3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf2ird2Q99NI3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf2ird2Q99NI3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf2ird2Q99NI3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf2ird2Q99NI3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf2ird2Q99NI3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf2ird2Q99NI3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gtf2ird2Q99NI3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gtf2ird2Q99NI3 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gtf2ird2Q99NI3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gtf2ird2Q99NI3 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gtf2ird2Q99NI3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gtf2ird2Q99NI3 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gtf2ird2Q99NI3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gtf2ird2Q99NI3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gtf2ird2Q99NI3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gtf2ird2Q99NI3 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Gtf2ird2Q99NI3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Gtf2ird2Q99NI3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gtf2ird2Q99NI3 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gtf2ird2Q99NI3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gtf2ird2Q99NI3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gtf2ird2Q99NI3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.69■□□□□ 0.42
Gtf2ird2Q99NI3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gtf2ird2Q99NI3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gtf2ird2Q99NI3 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Gtf2ird2Q99NI3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf2ird2Q99NI3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.68■□□□□ 0.42
Gtf2ird2Q99NI3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Gtf2ird2Q99NI3 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf2ird2Q99NI3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Gtf2ird2Q99NI3 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Gtf2ird2Q99NI3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf2ird2Q99NI3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.68■□□□□ 0.42
Gtf2ird2Q99NI3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Gtf2ird2Q99NI3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf2ird2Q99NI3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf2ird2Q99NI3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf2ird2Q99NI3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf2ird2Q99NI3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf2ird2Q99NI3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf2ird2Q99NI3 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gtf2ird2Q99NI3 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gtf2ird2Q99NI3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gtf2ird2Q99NI3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gtf2ird2Q99NI3 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gtf2ird2Q99NI3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.67■□□□□ 0.42
Gtf2ird2Q99NI3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.67■□□□□ 0.42
Gtf2ird2Q99NI3 Gm17661-201ENSMUST00000170317 270 ntBASIC17.67■□□□□ 0.42
Gtf2ird2Q99NI3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.67■□□□□ 0.42
Gtf2ird2Q99NI3 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.67■□□□□ 0.42
Gtf2ird2Q99NI3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gtf2ird2Q99NI3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gtf2ird2Q99NI3 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gtf2ird2Q99NI3 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.67■□□□□ 0.42
Gtf2ird2Q99NI3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gtf2ird2Q99NI3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf2ird2Q99NI3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf2ird2Q99NI3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.66■□□□□ 0.42
Gtf2ird2Q99NI3 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf2ird2Q99NI3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf2ird2Q99NI3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf2ird2Q99NI3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf2ird2Q99NI3 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf2ird2Q99NI3 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf2ird2Q99NI3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf2ird2Q99NI3 Gm2274-201ENSMUST00000184539 609 ntBASIC17.66■□□□□ 0.42
Gtf2ird2Q99NI3 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf2ird2Q99NI3 Gm7791-201ENSMUST00000219066 539 ntBASIC17.66■□□□□ 0.42
Gtf2ird2Q99NI3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.66■□□□□ 0.42
Gtf2ird2Q99NI3 Il3ra-202ENSMUST00000223589 738 ntBASIC17.66■□□□□ 0.42
Gtf2ird2Q99NI3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf2ird2Q99NI3 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf2ird2Q99NI3 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.66■□□□□ 0.42
Gtf2ird2Q99NI3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf2ird2Q99NI3 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf2ird2Q99NI3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf2ird2Q99NI3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf2ird2Q99NI3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf2ird2Q99NI3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf2ird2Q99NI3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf2ird2Q99NI3 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gtf2ird2Q99NI3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Gtf2ird2Q99NI3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gtf2ird2Q99NI3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gtf2ird2Q99NI3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gtf2ird2Q99NI3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gtf2ird2Q99NI3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gtf2ird2Q99NI3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Gtf2ird2Q99NI3 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.65■□□□□ 0.42
Gtf2ird2Q99NI3 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms