Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdha3Q91Y16 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha3Q91Y16 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha3Q91Y16 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pcdha3Q91Y16 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha3Q91Y16 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha3Q91Y16 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18■□□□□ 0.47
Pcdha3Q91Y16 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18■□□□□ 0.47
Pcdha3Q91Y16 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha3Q91Y16 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18■□□□□ 0.47
Pcdha3Q91Y16 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18■□□□□ 0.47
Pcdha3Q91Y16 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha3Q91Y16 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha3Q91Y16 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18■□□□□ 0.47
Pcdha3Q91Y16 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18■□□□□ 0.47
Pcdha3Q91Y16 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha3Q91Y16 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha3Q91Y16 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha3Q91Y16 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha3Q91Y16 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdha3Q91Y16 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdha3Q91Y16 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha3Q91Y16 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Pcdha3Q91Y16 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Pcdha3Q91Y16 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha3Q91Y16 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha3Q91Y16 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha3Q91Y16 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha3Q91Y16 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha3Q91Y16 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha3Q91Y16 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Pcdha3Q91Y16 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha3Q91Y16 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.99■□□□□ 0.47
Pcdha3Q91Y16 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha3Q91Y16 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha3Q91Y16 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha3Q91Y16 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.98■□□□□ 0.47
Pcdha3Q91Y16 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha3Q91Y16 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha3Q91Y16 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pcdha3Q91Y16 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Pcdha3Q91Y16 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha3Q91Y16 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha3Q91Y16 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha3Q91Y16 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Pcdha3Q91Y16 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Pcdha3Q91Y16 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Pcdha3Q91Y16 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Pcdha3Q91Y16 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.98■□□□□ 0.47
Pcdha3Q91Y16 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.98■□□□□ 0.47
Pcdha3Q91Y16 Gm21814-202ENSMUST00000203277 873 ntBASIC17.98■□□□□ 0.47
Pcdha3Q91Y16 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.98■□□□□ 0.47
Pcdha3Q91Y16 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha3Q91Y16 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha3Q91Y16 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha3Q91Y16 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha3Q91Y16 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Pcdha3Q91Y16 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha3Q91Y16 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha3Q91Y16 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha3Q91Y16 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha3Q91Y16 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha3Q91Y16 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pcdha3Q91Y16 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.97■□□□□ 0.47
Pcdha3Q91Y16 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pcdha3Q91Y16 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.97■□□□□ 0.47
Pcdha3Q91Y16 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pcdha3Q91Y16 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha3Q91Y16 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha3Q91Y16 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Pcdha3Q91Y16 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha3Q91Y16 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha3Q91Y16 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha3Q91Y16 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha3Q91Y16 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha3Q91Y16 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.96■□□□□ 0.47
Pcdha3Q91Y16 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdha3Q91Y16 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha3Q91Y16 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Pcdha3Q91Y16 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha3Q91Y16 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Pcdha3Q91Y16 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha3Q91Y16 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha3Q91Y16 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.96■□□□□ 0.47
Pcdha3Q91Y16 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha3Q91Y16 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.96■□□□□ 0.47
Pcdha3Q91Y16 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.96■□□□□ 0.47
Pcdha3Q91Y16 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.96■□□□□ 0.47
Pcdha3Q91Y16 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.96■□□□□ 0.47
Pcdha3Q91Y16 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha3Q91Y16 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha3Q91Y16 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha3Q91Y16 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha3Q91Y16 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdha3Q91Y16 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Pcdha3Q91Y16 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pcdha3Q91Y16 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pcdha3Q91Y16 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Pcdha3Q91Y16 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha3Q91Y16 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms