Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhac1Q91Y10 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhac1Q91Y10 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhac1Q91Y10 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Pcdhac1Q91Y10 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhac1Q91Y10 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhac1Q91Y10 Zfp783-201ENSMUST00000095946 670 ntBASIC16.12■□□□□ 0.17
Pcdhac1Q91Y10 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhac1Q91Y10 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhac1Q91Y10 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhac1Q91Y10 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhac1Q91Y10 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhac1Q91Y10 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhac1Q91Y10 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhac1Q91Y10 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhac1Q91Y10 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhac1Q91Y10 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Pcdhac1Q91Y10 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhac1Q91Y10 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhac1Q91Y10 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhac1Q91Y10 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhac1Q91Y10 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.11■□□□□ 0.17
Pcdhac1Q91Y10 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.11■□□□□ 0.17
Pcdhac1Q91Y10 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhac1Q91Y10 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhac1Q91Y10 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhac1Q91Y10 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhac1Q91Y10 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhac1Q91Y10 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhac1Q91Y10 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhac1Q91Y10 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.11■□□□□ 0.17
Pcdhac1Q91Y10 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhac1Q91Y10 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pcdhac1Q91Y10 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhac1Q91Y10 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhac1Q91Y10 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdhac1Q91Y10 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhac1Q91Y10 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhac1Q91Y10 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhac1Q91Y10 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhac1Q91Y10 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhac1Q91Y10 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhac1Q91Y10 Gm12527-201ENSMUST00000117967 564 ntBASIC16.1■□□□□ 0.17
Pcdhac1Q91Y10 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.1■□□□□ 0.17
Pcdhac1Q91Y10 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhac1Q91Y10 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhac1Q91Y10 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhac1Q91Y10 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.1■□□□□ 0.17
Pcdhac1Q91Y10 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhac1Q91Y10 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhac1Q91Y10 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhac1Q91Y10 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhac1Q91Y10 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhac1Q91Y10 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.1■□□□□ 0.17
Pcdhac1Q91Y10 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhac1Q91Y10 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Pcdhac1Q91Y10 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhac1Q91Y10 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhac1Q91Y10 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhac1Q91Y10 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhac1Q91Y10 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhac1Q91Y10 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhac1Q91Y10 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhac1Q91Y10 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhac1Q91Y10 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Pcdhac1Q91Y10 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhac1Q91Y10 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhac1Q91Y10 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pcdhac1Q91Y10 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhac1Q91Y10 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.09■□□□□ 0.17
Pcdhac1Q91Y10 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhac1Q91Y10 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhac1Q91Y10 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhac1Q91Y10 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhac1Q91Y10 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhac1Q91Y10 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhac1Q91Y10 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhac1Q91Y10 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pcdhac1Q91Y10 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhac1Q91Y10 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Pcdhac1Q91Y10 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhac1Q91Y10 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhac1Q91Y10 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Pcdhac1Q91Y10 Gm11927-201ENSMUST00000118472 759 ntBASIC16.08■□□□□ 0.16
Pcdhac1Q91Y10 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.08■□□□□ 0.16
Pcdhac1Q91Y10 Gm29791-202ENSMUST00000207888 369 ntBASIC16.08■□□□□ 0.16
Pcdhac1Q91Y10 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhac1Q91Y10 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhac1Q91Y10 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhac1Q91Y10 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhac1Q91Y10 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhac1Q91Y10 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhac1Q91Y10 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhac1Q91Y10 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhac1Q91Y10 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhac1Q91Y10 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhac1Q91Y10 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhac1Q91Y10 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhac1Q91Y10 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdhac1Q91Y10 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms