Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 Gm27000-201ENSMUST00000182943 842 ntBASIC18.67■□□□□ 0.58
Pcdhac2Q91Y09 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.67■□□□□ 0.58
Pcdhac2Q91Y09 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhac2Q91Y09 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.67■□□□□ 0.58
Pcdhac2Q91Y09 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhac2Q91Y09 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.67■□□□□ 0.58
Pcdhac2Q91Y09 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhac2Q91Y09 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhac2Q91Y09 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhac2Q91Y09 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhac2Q91Y09 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhac2Q91Y09 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhac2Q91Y09 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhac2Q91Y09 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Pcdhac2Q91Y09 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhac2Q91Y09 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.66■□□□□ 0.58
Pcdhac2Q91Y09 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhac2Q91Y09 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhac2Q91Y09 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhac2Q91Y09 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Pcdhac2Q91Y09 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.65■□□□□ 0.58
Pcdhac2Q91Y09 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhac2Q91Y09 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhac2Q91Y09 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Pcdhac2Q91Y09 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhac2Q91Y09 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhac2Q91Y09 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Pcdhac2Q91Y09 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhac2Q91Y09 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhac2Q91Y09 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Pcdhac2Q91Y09 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdhac2Q91Y09 Gm45328-201ENSMUST00000210942 917 ntBASIC18.65■□□□□ 0.58
Pcdhac2Q91Y09 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhac2Q91Y09 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhac2Q91Y09 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhac2Q91Y09 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.65■□□□□ 0.58
Pcdhac2Q91Y09 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Pcdhac2Q91Y09 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhac2Q91Y09 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhac2Q91Y09 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhac2Q91Y09 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhac2Q91Y09 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhac2Q91Y09 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Pcdhac2Q91Y09 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhac2Q91Y09 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhac2Q91Y09 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhac2Q91Y09 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhac2Q91Y09 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Pcdhac2Q91Y09 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Pcdhac2Q91Y09 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.64■□□□□ 0.57
Pcdhac2Q91Y09 Gm44771-201ENSMUST00000206975 626 ntBASIC18.64■□□□□ 0.57
Pcdhac2Q91Y09 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Pcdhac2Q91Y09 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhac2Q91Y09 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdhac2Q91Y09 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhac2Q91Y09 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhac2Q91Y09 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhac2Q91Y09 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhac2Q91Y09 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhac2Q91Y09 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhac2Q91Y09 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.63■□□□□ 0.57
Pcdhac2Q91Y09 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Pcdhac2Q91Y09 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhac2Q91Y09 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhac2Q91Y09 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhac2Q91Y09 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhac2Q91Y09 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhac2Q91Y09 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhac2Q91Y09 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhac2Q91Y09 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhac2Q91Y09 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhac2Q91Y09 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhac2Q91Y09 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhac2Q91Y09 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhac2Q91Y09 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhac2Q91Y09 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhac2Q91Y09 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdhac2Q91Y09 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Pcdhac2Q91Y09 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhac2Q91Y09 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhac2Q91Y09 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdhac2Q91Y09 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhac2Q91Y09 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhac2Q91Y09 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdhac2Q91Y09 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhac2Q91Y09 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhac2Q91Y09 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhac2Q91Y09 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhac2Q91Y09 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhac2Q91Y09 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhac2Q91Y09 Phf7-203ENSMUST00000226565 1971 ntBASIC18.61■□□□□ 0.57
Pcdhac2Q91Y09 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.61■□□□□ 0.57
Pcdhac2Q91Y09 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhac2Q91Y09 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhac2Q91Y09 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhac2Q91Y09 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhac2Q91Y09 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhac2Q91Y09 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhac2Q91Y09 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhac2Q91Y09 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms