Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdhb6Q91XZ4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb6Q91XZ4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb6Q91XZ4 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb6Q91XZ4 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb6Q91XZ4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhb6Q91XZ4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb6Q91XZ4 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb6Q91XZ4 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb6Q91XZ4 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb6Q91XZ4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb6Q91XZ4 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.67■□□□□ 0.42
Pcdhb6Q91XZ4 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.67■□□□□ 0.42
Pcdhb6Q91XZ4 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Pcdhb6Q91XZ4 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.67■□□□□ 0.42
Pcdhb6Q91XZ4 Timm23-208ENSMUST00000226683 750 ntBASIC17.67■□□□□ 0.42
Pcdhb6Q91XZ4 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.67■□□□□ 0.42
Pcdhb6Q91XZ4 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb6Q91XZ4 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb6Q91XZ4 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Pcdhb6Q91XZ4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb6Q91XZ4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pcdhb6Q91XZ4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb6Q91XZ4 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.67■□□□□ 0.42
Pcdhb6Q91XZ4 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.67■□□□□ 0.42
Pcdhb6Q91XZ4 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb6Q91XZ4 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb6Q91XZ4 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb6Q91XZ4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb6Q91XZ4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb6Q91XZ4 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdhb6Q91XZ4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb6Q91XZ4 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb6Q91XZ4 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdhb6Q91XZ4 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb6Q91XZ4 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb6Q91XZ4 Gm7638-201ENSMUST00000121348 967 ntBASIC17.66■□□□□ 0.42
Pcdhb6Q91XZ4 Gm9731-201ENSMUST00000209480 747 ntBASIC17.66■□□□□ 0.42
Pcdhb6Q91XZ4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdhb6Q91XZ4 Odf3b-204ENSMUST00000227834 930 ntBASIC17.66■□□□□ 0.42
Pcdhb6Q91XZ4 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb6Q91XZ4 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Pcdhb6Q91XZ4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb6Q91XZ4 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhb6Q91XZ4 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb6Q91XZ4 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb6Q91XZ4 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb6Q91XZ4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb6Q91XZ4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb6Q91XZ4 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.65■□□□□ 0.42
Pcdhb6Q91XZ4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb6Q91XZ4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdhb6Q91XZ4 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb6Q91XZ4 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhb6Q91XZ4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdhb6Q91XZ4 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb6Q91XZ4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb6Q91XZ4 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb6Q91XZ4 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.65■□□□□ 0.42
Pcdhb6Q91XZ4 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb6Q91XZ4 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb6Q91XZ4 Gm10812-201ENSMUST00000099864 546 ntBASIC17.65■□□□□ 0.42
Pcdhb6Q91XZ4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb6Q91XZ4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb6Q91XZ4 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb6Q91XZ4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb6Q91XZ4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhb6Q91XZ4 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb6Q91XZ4 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhb6Q91XZ4 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb6Q91XZ4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb6Q91XZ4 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhb6Q91XZ4 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhb6Q91XZ4 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhb6Q91XZ4 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhb6Q91XZ4 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhb6Q91XZ4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhb6Q91XZ4 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhb6Q91XZ4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhb6Q91XZ4 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb6Q91XZ4 Gm21814-202ENSMUST00000203277 873 ntBASIC17.64■□□□□ 0.41
Pcdhb6Q91XZ4 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.64■□□□□ 0.41
Pcdhb6Q91XZ4 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdhb6Q91XZ4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Pcdhb6Q91XZ4 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb6Q91XZ4 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb6Q91XZ4 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb6Q91XZ4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb6Q91XZ4 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb6Q91XZ4 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb6Q91XZ4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb6Q91XZ4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb6Q91XZ4 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdhb6Q91XZ4 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdhb6Q91XZ4 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb6Q91XZ4 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdhb6Q91XZ4 Il3ra-202ENSMUST00000223589 738 ntBASIC17.63■□□□□ 0.41
Pcdhb6Q91XZ4 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb6Q91XZ4 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb6Q91XZ4 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms