Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb8Q91XZ2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdhb8Q91XZ2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdhb8Q91XZ2 Gm5643-201ENSMUST00000117081 966 ntBASIC16.82■□□□□ 0.28
Pcdhb8Q91XZ2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.82■□□□□ 0.28
Pcdhb8Q91XZ2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pcdhb8Q91XZ2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Pcdhb8Q91XZ2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb8Q91XZ2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb8Q91XZ2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb8Q91XZ2 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.82■□□□□ 0.28
Pcdhb8Q91XZ2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb8Q91XZ2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb8Q91XZ2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Pcdhb8Q91XZ2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb8Q91XZ2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb8Q91XZ2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb8Q91XZ2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb8Q91XZ2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb8Q91XZ2 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhb8Q91XZ2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.81■□□□□ 0.28
Pcdhb8Q91XZ2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb8Q91XZ2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.81■□□□□ 0.28
Pcdhb8Q91XZ2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb8Q91XZ2 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdhb8Q91XZ2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb8Q91XZ2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb8Q91XZ2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb8Q91XZ2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb8Q91XZ2 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhb8Q91XZ2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdhb8Q91XZ2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb8Q91XZ2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb8Q91XZ2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb8Q91XZ2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb8Q91XZ2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.8■□□□□ 0.28
Pcdhb8Q91XZ2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb8Q91XZ2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb8Q91XZ2 Gm10653-202ENSMUST00000139570 835 ntBASIC16.8■□□□□ 0.28
Pcdhb8Q91XZ2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhb8Q91XZ2 Gm43183-201ENSMUST00000200632 547 ntBASIC16.8■□□□□ 0.28
Pcdhb8Q91XZ2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb8Q91XZ2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb8Q91XZ2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb8Q91XZ2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb8Q91XZ2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb8Q91XZ2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb8Q91XZ2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb8Q91XZ2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb8Q91XZ2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Pcdhb8Q91XZ2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb8Q91XZ2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb8Q91XZ2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb8Q91XZ2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb8Q91XZ2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb8Q91XZ2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb8Q91XZ2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb8Q91XZ2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb8Q91XZ2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhb8Q91XZ2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Pcdhb8Q91XZ2 Gm4974-201ENSMUST00000209974 875 ntBASIC16.79■□□□□ 0.28
Pcdhb8Q91XZ2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.79■□□□□ 0.28
Pcdhb8Q91XZ2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhb8Q91XZ2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb8Q91XZ2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhb8Q91XZ2 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb8Q91XZ2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb8Q91XZ2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb8Q91XZ2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb8Q91XZ2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb8Q91XZ2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb8Q91XZ2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb8Q91XZ2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.78■□□□□ 0.28
Pcdhb8Q91XZ2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb8Q91XZ2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdhb8Q91XZ2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb8Q91XZ2 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.78■□□□□ 0.28
Pcdhb8Q91XZ2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb8Q91XZ2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb8Q91XZ2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhb8Q91XZ2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb8Q91XZ2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb8Q91XZ2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhb8Q91XZ2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhb8Q91XZ2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdhb8Q91XZ2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb8Q91XZ2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.78■□□□□ 0.28
Pcdhb8Q91XZ2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb8Q91XZ2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb8Q91XZ2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb8Q91XZ2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb8Q91XZ2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhb8Q91XZ2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb8Q91XZ2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.77■□□□□ 0.28
Pcdhb8Q91XZ2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb8Q91XZ2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhb8Q91XZ2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb8Q91XZ2 Gm15378-201ENSMUST00000121894 207 ntBASIC16.77■□□□□ 0.28
Pcdhb8Q91XZ2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhb8Q91XZ2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms