Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga3Q91XY5 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhga3Q91XY5 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.33■□□□□ 0.05
Pcdhga3Q91XY5 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Pcdhga3Q91XY5 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga3Q91XY5 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga3Q91XY5 Gm11643-201ENSMUST00000119578 864 ntBASIC15.33■□□□□ 0.04
Pcdhga3Q91XY5 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga3Q91XY5 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.33■□□□□ 0.04
Pcdhga3Q91XY5 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Pcdhga3Q91XY5 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga3Q91XY5 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.33■□□□□ 0.04
Pcdhga3Q91XY5 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga3Q91XY5 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga3Q91XY5 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga3Q91XY5 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.33■□□□□ 0.04
Pcdhga3Q91XY5 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga3Q91XY5 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga3Q91XY5 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga3Q91XY5 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga3Q91XY5 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga3Q91XY5 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga3Q91XY5 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga3Q91XY5 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhga3Q91XY5 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhga3Q91XY5 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga3Q91XY5 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga3Q91XY5 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga3Q91XY5 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhga3Q91XY5 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhga3Q91XY5 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga3Q91XY5 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.32■□□□□ 0.04
Pcdhga3Q91XY5 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga3Q91XY5 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga3Q91XY5 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga3Q91XY5 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhga3Q91XY5 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga3Q91XY5 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga3Q91XY5 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga3Q91XY5 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga3Q91XY5 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga3Q91XY5 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga3Q91XY5 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga3Q91XY5 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga3Q91XY5 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Pcdhga3Q91XY5 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga3Q91XY5 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhga3Q91XY5 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga3Q91XY5 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pcdhga3Q91XY5 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga3Q91XY5 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga3Q91XY5 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga3Q91XY5 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga3Q91XY5 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pcdhga3Q91XY5 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga3Q91XY5 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pcdhga3Q91XY5 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhga3Q91XY5 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga3Q91XY5 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhga3Q91XY5 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga3Q91XY5 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.31■□□□□ 0.04
Pcdhga3Q91XY5 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga3Q91XY5 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga3Q91XY5 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga3Q91XY5 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga3Q91XY5 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga3Q91XY5 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga3Q91XY5 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga3Q91XY5 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhga3Q91XY5 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga3Q91XY5 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga3Q91XY5 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga3Q91XY5 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhga3Q91XY5 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.3■□□□□ 0.04
Pcdhga3Q91XY5 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.3■□□□□ 0.04
Pcdhga3Q91XY5 Gm20760-201ENSMUST00000179197 648 ntBASIC15.3■□□□□ 0.04
Pcdhga3Q91XY5 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga3Q91XY5 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga3Q91XY5 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.3■□□□□ 0.04
Pcdhga3Q91XY5 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.3■□□□□ 0.04
Pcdhga3Q91XY5 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Pcdhga3Q91XY5 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.3■□□□□ 0.04
Pcdhga3Q91XY5 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga3Q91XY5 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga3Q91XY5 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga3Q91XY5 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga3Q91XY5 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga3Q91XY5 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhga3Q91XY5 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga3Q91XY5 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga3Q91XY5 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga3Q91XY5 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga3Q91XY5 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhga3Q91XY5 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga3Q91XY5 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga3Q91XY5 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga3Q91XY5 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga3Q91XY5 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga3Q91XY5 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga3Q91XY5 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms