Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga9Q91XX9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga9Q91XX9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga9Q91XX9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga9Q91XX9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga9Q91XX9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhga9Q91XX9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga9Q91XX9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdhga9Q91XX9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga9Q91XX9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga9Q91XX9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdhga9Q91XX9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhga9Q91XX9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga9Q91XX9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga9Q91XX9 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga9Q91XX9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga9Q91XX9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga9Q91XX9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga9Q91XX9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga9Q91XX9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga9Q91XX9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga9Q91XX9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga9Q91XX9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga9Q91XX9 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga9Q91XX9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga9Q91XX9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga9Q91XX9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga9Q91XX9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga9Q91XX9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga9Q91XX9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhga9Q91XX9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga9Q91XX9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga9Q91XX9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
Pcdhga9Q91XX9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga9Q91XX9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga9Q91XX9 Odf3b-204ENSMUST00000227834 930 ntBASIC17.03■□□□□ 0.32
Pcdhga9Q91XX9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga9Q91XX9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga9Q91XX9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhga9Q91XX9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga9Q91XX9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga9Q91XX9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga9Q91XX9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga9Q91XX9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga9Q91XX9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhga9Q91XX9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhga9Q91XX9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Pcdhga9Q91XX9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhga9Q91XX9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhga9Q91XX9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdhga9Q91XX9 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Pcdhga9Q91XX9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.02■□□□□ 0.32
Pcdhga9Q91XX9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.02■□□□□ 0.32
Pcdhga9Q91XX9 Timm23-208ENSMUST00000226683 750 ntBASIC17.02■□□□□ 0.32
Pcdhga9Q91XX9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Pcdhga9Q91XX9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhga9Q91XX9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Pcdhga9Q91XX9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhga9Q91XX9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Pcdhga9Q91XX9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhga9Q91XX9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhga9Q91XX9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhga9Q91XX9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhga9Q91XX9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhga9Q91XX9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhga9Q91XX9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Pcdhga9Q91XX9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.01■□□□□ 0.31
Pcdhga9Q91XX9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga9Q91XX9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga9Q91XX9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga9Q91XX9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga9Q91XX9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga9Q91XX9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga9Q91XX9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga9Q91XX9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga9Q91XX9 Gm12085-201ENSMUST00000119263 940 ntBASIC17.01■□□□□ 0.31
Pcdhga9Q91XX9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.01■□□□□ 0.31
Pcdhga9Q91XX9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga9Q91XX9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Pcdhga9Q91XX9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga9Q91XX9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga9Q91XX9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga9Q91XX9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhga9Q91XX9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga9Q91XX9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga9Q91XX9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga9Q91XX9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga9Q91XX9 Gm10231-201ENSMUST00000181584 441 ntBASIC17■□□□□ 0.31
Pcdhga9Q91XX9 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga9Q91XX9 Gm10175-202ENSMUST00000208752 441 ntBASIC17■□□□□ 0.31
Pcdhga9Q91XX9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga9Q91XX9 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga9Q91XX9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Pcdhga9Q91XX9 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga9Q91XX9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga9Q91XX9 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga9Q91XX9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhga9Q91XX9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga9Q91XX9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga9Q91XX9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms