Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb11Q91UZ8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb11Q91UZ8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhb11Q91UZ8 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb11Q91UZ8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhb11Q91UZ8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb11Q91UZ8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb11Q91UZ8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdhb11Q91UZ8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb11Q91UZ8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhb11Q91UZ8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhb11Q91UZ8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb11Q91UZ8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb11Q91UZ8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdhb11Q91UZ8 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhb11Q91UZ8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb11Q91UZ8 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.64■□□□□ 0.41
Pcdhb11Q91UZ8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdhb11Q91UZ8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb11Q91UZ8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb11Q91UZ8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb11Q91UZ8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb11Q91UZ8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb11Q91UZ8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb11Q91UZ8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb11Q91UZ8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb11Q91UZ8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb11Q91UZ8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb11Q91UZ8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Pcdhb11Q91UZ8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Pcdhb11Q91UZ8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Pcdhb11Q91UZ8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.63■□□□□ 0.41
Pcdhb11Q91UZ8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb11Q91UZ8 Gm10252-201ENSMUST00000209541 832 ntBASIC17.63■□□□□ 0.41
Pcdhb11Q91UZ8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb11Q91UZ8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Pcdhb11Q91UZ8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb11Q91UZ8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb11Q91UZ8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Pcdhb11Q91UZ8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb11Q91UZ8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb11Q91UZ8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb11Q91UZ8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb11Q91UZ8 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pcdhb11Q91UZ8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb11Q91UZ8 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pcdhb11Q91UZ8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.62■□□□□ 0.41
Pcdhb11Q91UZ8 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.62■□□□□ 0.41
Pcdhb11Q91UZ8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb11Q91UZ8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.62■□□□□ 0.41
Pcdhb11Q91UZ8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb11Q91UZ8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb11Q91UZ8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb11Q91UZ8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb11Q91UZ8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb11Q91UZ8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb11Q91UZ8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb11Q91UZ8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb11Q91UZ8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb11Q91UZ8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Pcdhb11Q91UZ8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb11Q91UZ8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pcdhb11Q91UZ8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb11Q91UZ8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Pcdhb11Q91UZ8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb11Q91UZ8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb11Q91UZ8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Pcdhb11Q91UZ8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.61■□□□□ 0.41
Pcdhb11Q91UZ8 Gm37055-201ENSMUST00000191866 133 ntBASIC17.61■□□□□ 0.41
Pcdhb11Q91UZ8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.61■□□□□ 0.41
Pcdhb11Q91UZ8 Gm37025-201ENSMUST00000195159 829 ntBASIC17.61■□□□□ 0.41
Pcdhb11Q91UZ8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.61■□□□□ 0.41
Pcdhb11Q91UZ8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb11Q91UZ8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb11Q91UZ8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pcdhb11Q91UZ8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Pcdhb11Q91UZ8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb11Q91UZ8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhb11Q91UZ8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhb11Q91UZ8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhb11Q91UZ8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb11Q91UZ8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb11Q91UZ8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb11Q91UZ8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb11Q91UZ8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb11Q91UZ8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb11Q91UZ8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.6■□□□□ 0.41
Pcdhb11Q91UZ8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb11Q91UZ8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.6■□□□□ 0.41
Pcdhb11Q91UZ8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb11Q91UZ8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb11Q91UZ8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb11Q91UZ8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb11Q91UZ8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb11Q91UZ8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Pcdhb11Q91UZ8 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.59■□□□□ 0.41
Pcdhb11Q91UZ8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb11Q91UZ8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb11Q91UZ8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb11Q91UZ8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms