Protein–RNA interactions for Protein: Q8VCE1

Dnajc28, DnaJ homolog subfamily C member 28, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnajc28Q8VCE1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Dnajc28Q8VCE1 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.76■□□□□ 0.59
Dnajc28Q8VCE1 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Dnajc28Q8VCE1 Gm33142-201ENSMUST00000193913 867 ntBASIC18.76■□□□□ 0.59
Dnajc28Q8VCE1 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.76■□□□□ 0.59
Dnajc28Q8VCE1 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Dnajc28Q8VCE1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Dnajc28Q8VCE1 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Dnajc28Q8VCE1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Dnajc28Q8VCE1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Dnajc28Q8VCE1 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Dnajc28Q8VCE1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.75■□□□□ 0.59
Dnajc28Q8VCE1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Dnajc28Q8VCE1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Dnajc28Q8VCE1 Gm13401-201ENSMUST00000117074 291 ntBASIC18.75■□□□□ 0.59
Dnajc28Q8VCE1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.75■□□□□ 0.59
Dnajc28Q8VCE1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Dnajc28Q8VCE1 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Dnajc28Q8VCE1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Dnajc28Q8VCE1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Dnajc28Q8VCE1 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Dnajc28Q8VCE1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Dnajc28Q8VCE1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Dnajc28Q8VCE1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Dnajc28Q8VCE1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Dnajc28Q8VCE1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Dnajc28Q8VCE1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Dnajc28Q8VCE1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Dnajc28Q8VCE1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
Dnajc28Q8VCE1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Dnajc28Q8VCE1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.74■□□□□ 0.59
Dnajc28Q8VCE1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Dnajc28Q8VCE1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Dnajc28Q8VCE1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Dnajc28Q8VCE1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Dnajc28Q8VCE1 Tgds-204ENSMUST00000228543 1594 ntBASIC18.74■□□□□ 0.59
Dnajc28Q8VCE1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Dnajc28Q8VCE1 Gm10418-201ENSMUST00000100943 576 ntBASIC18.74■□□□□ 0.59
Dnajc28Q8VCE1 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Dnajc28Q8VCE1 Gm7638-201ENSMUST00000121348 967 ntBASIC18.74■□□□□ 0.59
Dnajc28Q8VCE1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.74■□□□□ 0.59
Dnajc28Q8VCE1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.74■□□□□ 0.59
Dnajc28Q8VCE1 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Dnajc28Q8VCE1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Dnajc28Q8VCE1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Dnajc28Q8VCE1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.74■□□□□ 0.59
Dnajc28Q8VCE1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Dnajc28Q8VCE1 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Dnajc28Q8VCE1 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Dnajc28Q8VCE1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Dnajc28Q8VCE1 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dnajc28Q8VCE1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dnajc28Q8VCE1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dnajc28Q8VCE1 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Dnajc28Q8VCE1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dnajc28Q8VCE1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.73■□□□□ 0.59
Dnajc28Q8VCE1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Dnajc28Q8VCE1 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Dnajc28Q8VCE1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.73■□□□□ 0.59
Dnajc28Q8VCE1 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dnajc28Q8VCE1 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.73■□□□□ 0.59
Dnajc28Q8VCE1 Gm7791-201ENSMUST00000219066 539 ntBASIC18.73■□□□□ 0.59
Dnajc28Q8VCE1 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dnajc28Q8VCE1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dnajc28Q8VCE1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.73■□□□□ 0.59
Dnajc28Q8VCE1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dnajc28Q8VCE1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dnajc28Q8VCE1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Dnajc28Q8VCE1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dnajc28Q8VCE1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dnajc28Q8VCE1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dnajc28Q8VCE1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dnajc28Q8VCE1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dnajc28Q8VCE1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Dnajc28Q8VCE1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Dnajc28Q8VCE1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dnajc28Q8VCE1 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dnajc28Q8VCE1 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Dnajc28Q8VCE1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dnajc28Q8VCE1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dnajc28Q8VCE1 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.72■□□□□ 0.59
Dnajc28Q8VCE1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Dnajc28Q8VCE1 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Dnajc28Q8VCE1 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dnajc28Q8VCE1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.72■□□□□ 0.59
Dnajc28Q8VCE1 Gm24841-201ENSMUST00000158676 357 ntBASIC18.72■□□□□ 0.59
Dnajc28Q8VCE1 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Dnajc28Q8VCE1 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Dnajc28Q8VCE1 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dnajc28Q8VCE1 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dnajc28Q8VCE1 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dnajc28Q8VCE1 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dnajc28Q8VCE1 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Dnajc28Q8VCE1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.72■□□□□ 0.59
Dnajc28Q8VCE1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dnajc28Q8VCE1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Dnajc28Q8VCE1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Dnajc28Q8VCE1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dnajc28Q8VCE1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dnajc28Q8VCE1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms