Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Rpap2Q8VC34 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpap2Q8VC34 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpap2Q8VC34 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rpap2Q8VC34 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Rpap2Q8VC34 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpap2Q8VC34 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.88■□□□□ 0.61
Rpap2Q8VC34 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Rpap2Q8VC34 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rpap2Q8VC34 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.88■□□□□ 0.61
Rpap2Q8VC34 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpap2Q8VC34 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rpap2Q8VC34 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rpap2Q8VC34 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rpap2Q8VC34 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Rpap2Q8VC34 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.88■□□□□ 0.61
Rpap2Q8VC34 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpap2Q8VC34 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.88■□□□□ 0.61
Rpap2Q8VC34 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpap2Q8VC34 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpap2Q8VC34 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpap2Q8VC34 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpap2Q8VC34 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rpap2Q8VC34 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Rpap2Q8VC34 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpap2Q8VC34 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rpap2Q8VC34 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.87■□□□□ 0.61
Rpap2Q8VC34 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.87■□□□□ 0.61
Rpap2Q8VC34 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpap2Q8VC34 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.87■□□□□ 0.61
Rpap2Q8VC34 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rpap2Q8VC34 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpap2Q8VC34 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpap2Q8VC34 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rpap2Q8VC34 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rpap2Q8VC34 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpap2Q8VC34 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpap2Q8VC34 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpap2Q8VC34 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpap2Q8VC34 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpap2Q8VC34 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rpap2Q8VC34 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpap2Q8VC34 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Rpap2Q8VC34 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpap2Q8VC34 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rpap2Q8VC34 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpap2Q8VC34 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.86■□□□□ 0.61
Rpap2Q8VC34 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.86■□□□□ 0.61
Rpap2Q8VC34 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.86■□□□□ 0.61
Rpap2Q8VC34 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpap2Q8VC34 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpap2Q8VC34 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Rpap2Q8VC34 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpap2Q8VC34 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpap2Q8VC34 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rpap2Q8VC34 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpap2Q8VC34 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpap2Q8VC34 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpap2Q8VC34 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rpap2Q8VC34 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpap2Q8VC34 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpap2Q8VC34 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpap2Q8VC34 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rpap2Q8VC34 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.85■□□□□ 0.61
Rpap2Q8VC34 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpap2Q8VC34 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpap2Q8VC34 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Rpap2Q8VC34 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.85■□□□□ 0.61
Rpap2Q8VC34 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.85■□□□□ 0.61
Rpap2Q8VC34 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.85■□□□□ 0.61
Rpap2Q8VC34 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpap2Q8VC34 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpap2Q8VC34 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rpap2Q8VC34 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rpap2Q8VC34 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpap2Q8VC34 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpap2Q8VC34 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpap2Q8VC34 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpap2Q8VC34 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Rpap2Q8VC34 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpap2Q8VC34 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpap2Q8VC34 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Rpap2Q8VC34 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpap2Q8VC34 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpap2Q8VC34 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rpap2Q8VC34 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Rpap2Q8VC34 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.84■□□□□ 0.61
Rpap2Q8VC34 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.84■□□□□ 0.61
Rpap2Q8VC34 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpap2Q8VC34 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.84■□□□□ 0.61
Rpap2Q8VC34 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpap2Q8VC34 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpap2Q8VC34 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpap2Q8VC34 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Rpap2Q8VC34 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpap2Q8VC34 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Rpap2Q8VC34 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rpap2Q8VC34 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rpap2Q8VC34 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rpap2Q8VC34 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms