Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps39Q8R5L3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps39Q8R5L3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps39Q8R5L3 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Vps39Q8R5L3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Vps39Q8R5L3 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps39Q8R5L3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps39Q8R5L3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.26■□□□□ 0.35
Vps39Q8R5L3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vps39Q8R5L3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vps39Q8R5L3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps39Q8R5L3 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.25■□□□□ 0.35
Vps39Q8R5L3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps39Q8R5L3 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Vps39Q8R5L3 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vps39Q8R5L3 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Vps39Q8R5L3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps39Q8R5L3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps39Q8R5L3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.25■□□□□ 0.35
Vps39Q8R5L3 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Vps39Q8R5L3 Gm18666-201ENSMUST00000190039 958 ntBASIC17.25■□□□□ 0.35
Vps39Q8R5L3 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.25■□□□□ 0.35
Vps39Q8R5L3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.25■□□□□ 0.35
Vps39Q8R5L3 Gm20049-201ENSMUST00000219950 730 ntBASIC17.25■□□□□ 0.35
Vps39Q8R5L3 Gm18025-201ENSMUST00000221733 862 ntBASIC17.25■□□□□ 0.35
Vps39Q8R5L3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps39Q8R5L3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps39Q8R5L3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps39Q8R5L3 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.25■□□□□ 0.35
Vps39Q8R5L3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps39Q8R5L3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Vps39Q8R5L3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Vps39Q8R5L3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.24■□□□□ 0.35
Vps39Q8R5L3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Vps39Q8R5L3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps39Q8R5L3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps39Q8R5L3 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps39Q8R5L3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.24■□□□□ 0.35
Vps39Q8R5L3 Gm27275-201ENSMUST00000184318 272 ntBASIC17.24■□□□□ 0.35
Vps39Q8R5L3 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps39Q8R5L3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Vps39Q8R5L3 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps39Q8R5L3 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vps39Q8R5L3 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Vps39Q8R5L3 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps39Q8R5L3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps39Q8R5L3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.24■□□□□ 0.35
Vps39Q8R5L3 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps39Q8R5L3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.24■□□□□ 0.35
Vps39Q8R5L3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vps39Q8R5L3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps39Q8R5L3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.23■□□□□ 0.35
Vps39Q8R5L3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Vps39Q8R5L3 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Vps39Q8R5L3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps39Q8R5L3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps39Q8R5L3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vps39Q8R5L3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps39Q8R5L3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps39Q8R5L3 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Vps39Q8R5L3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Vps39Q8R5L3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vps39Q8R5L3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Vps39Q8R5L3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vps39Q8R5L3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps39Q8R5L3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps39Q8R5L3 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Vps39Q8R5L3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps39Q8R5L3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.23■□□□□ 0.35
Vps39Q8R5L3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.23■□□□□ 0.35
Vps39Q8R5L3 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps39Q8R5L3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps39Q8R5L3 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps39Q8R5L3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Vps39Q8R5L3 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps39Q8R5L3 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps39Q8R5L3 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps39Q8R5L3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Vps39Q8R5L3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps39Q8R5L3 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps39Q8R5L3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Vps39Q8R5L3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Vps39Q8R5L3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Vps39Q8R5L3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.22■□□□□ 0.35
Vps39Q8R5L3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.22■□□□□ 0.35
Vps39Q8R5L3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps39Q8R5L3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps39Q8R5L3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps39Q8R5L3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Vps39Q8R5L3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps39Q8R5L3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps39Q8R5L3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps39Q8R5L3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Vps39Q8R5L3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Vps39Q8R5L3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Vps39Q8R5L3 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps39Q8R5L3 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps39Q8R5L3 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps39Q8R5L3 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps39Q8R5L3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms