Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3kbp1Q8R550 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3kbp1Q8R550 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3kbp1Q8R550 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3kbp1Q8R550 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3kbp1Q8R550 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3kbp1Q8R550 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3kbp1Q8R550 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sh3kbp1Q8R550 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.76■□□□□ 0.43
Sh3kbp1Q8R550 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Sh3kbp1Q8R550 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Sh3kbp1Q8R550 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3kbp1Q8R550 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3kbp1Q8R550 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3kbp1Q8R550 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.75■□□□□ 0.43
Sh3kbp1Q8R550 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3kbp1Q8R550 Gm13401-201ENSMUST00000117074 291 ntBASIC17.75■□□□□ 0.43
Sh3kbp1Q8R550 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3kbp1Q8R550 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3kbp1Q8R550 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.75■□□□□ 0.43
Sh3kbp1Q8R550 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3kbp1Q8R550 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Sh3kbp1Q8R550 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.75■□□□□ 0.43
Sh3kbp1Q8R550 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3kbp1Q8R550 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.75■□□□□ 0.43
Sh3kbp1Q8R550 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3kbp1Q8R550 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3kbp1Q8R550 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3kbp1Q8R550 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sh3kbp1Q8R550 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.75■□□□□ 0.43
Sh3kbp1Q8R550 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3kbp1Q8R550 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Sh3kbp1Q8R550 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.74■□□□□ 0.43
Sh3kbp1Q8R550 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3kbp1Q8R550 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3kbp1Q8R550 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3kbp1Q8R550 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3kbp1Q8R550 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3kbp1Q8R550 Gm10517-202ENSMUST00000192970 758 ntBASIC17.74■□□□□ 0.43
Sh3kbp1Q8R550 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3kbp1Q8R550 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3kbp1Q8R550 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.74■□□□□ 0.43
Sh3kbp1Q8R550 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3kbp1Q8R550 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3kbp1Q8R550 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3kbp1Q8R550 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3kbp1Q8R550 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Sh3kbp1Q8R550 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3kbp1Q8R550 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3kbp1Q8R550 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3kbp1Q8R550 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sh3kbp1Q8R550 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Sh3kbp1Q8R550 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.73■□□□□ 0.43
Sh3kbp1Q8R550 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.73■□□□□ 0.43
Sh3kbp1Q8R550 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3kbp1Q8R550 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3kbp1Q8R550 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3kbp1Q8R550 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.73■□□□□ 0.43
Sh3kbp1Q8R550 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3kbp1Q8R550 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3kbp1Q8R550 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3kbp1Q8R550 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Sh3kbp1Q8R550 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Sh3kbp1Q8R550 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3kbp1Q8R550 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3kbp1Q8R550 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.73■□□□□ 0.43
Sh3kbp1Q8R550 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3kbp1Q8R550 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3kbp1Q8R550 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3kbp1Q8R550 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sh3kbp1Q8R550 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3kbp1Q8R550 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3kbp1Q8R550 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.72■□□□□ 0.43
Sh3kbp1Q8R550 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3kbp1Q8R550 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3kbp1Q8R550 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Sh3kbp1Q8R550 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3kbp1Q8R550 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.72■□□□□ 0.43
Sh3kbp1Q8R550 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.72■□□□□ 0.43
Sh3kbp1Q8R550 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Sh3kbp1Q8R550 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3kbp1Q8R550 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3kbp1Q8R550 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3kbp1Q8R550 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3kbp1Q8R550 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3kbp1Q8R550 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3kbp1Q8R550 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3kbp1Q8R550 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
Sh3kbp1Q8R550 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.71■□□□□ 0.43
Sh3kbp1Q8R550 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3kbp1Q8R550 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3kbp1Q8R550 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3kbp1Q8R550 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.71■□□□□ 0.43
Sh3kbp1Q8R550 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3kbp1Q8R550 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3kbp1Q8R550 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3kbp1Q8R550 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3kbp1Q8R550 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3kbp1Q8R550 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Sh3kbp1Q8R550 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms