Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cdt1Q8R4E9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdt1Q8R4E9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdt1Q8R4E9 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdt1Q8R4E9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cdt1Q8R4E9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdt1Q8R4E9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdt1Q8R4E9 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdt1Q8R4E9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdt1Q8R4E9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdt1Q8R4E9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cdt1Q8R4E9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdt1Q8R4E9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdt1Q8R4E9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.65■□□□□ 0.26
Cdt1Q8R4E9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cdt1Q8R4E9 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.65■□□□□ 0.26
Cdt1Q8R4E9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdt1Q8R4E9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdt1Q8R4E9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdt1Q8R4E9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdt1Q8R4E9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdt1Q8R4E9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdt1Q8R4E9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cdt1Q8R4E9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cdt1Q8R4E9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdt1Q8R4E9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.65■□□□□ 0.26
Cdt1Q8R4E9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cdt1Q8R4E9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.65■□□□□ 0.26
Cdt1Q8R4E9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.65■□□□□ 0.26
Cdt1Q8R4E9 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Cdt1Q8R4E9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdt1Q8R4E9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdt1Q8R4E9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdt1Q8R4E9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdt1Q8R4E9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdt1Q8R4E9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdt1Q8R4E9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Cdt1Q8R4E9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdt1Q8R4E9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cdt1Q8R4E9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cdt1Q8R4E9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cdt1Q8R4E9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cdt1Q8R4E9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdt1Q8R4E9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cdt1Q8R4E9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdt1Q8R4E9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdt1Q8R4E9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cdt1Q8R4E9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdt1Q8R4E9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cdt1Q8R4E9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdt1Q8R4E9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.64■□□□□ 0.25
Cdt1Q8R4E9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cdt1Q8R4E9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.64■□□□□ 0.25
Cdt1Q8R4E9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdt1Q8R4E9 Gm23634-201ENSMUST00000175071 91 ntBASIC16.64■□□□□ 0.25
Cdt1Q8R4E9 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.64■□□□□ 0.25
Cdt1Q8R4E9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.64■□□□□ 0.25
Cdt1Q8R4E9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cdt1Q8R4E9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdt1Q8R4E9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdt1Q8R4E9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cdt1Q8R4E9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdt1Q8R4E9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdt1Q8R4E9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdt1Q8R4E9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdt1Q8R4E9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdt1Q8R4E9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cdt1Q8R4E9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cdt1Q8R4E9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdt1Q8R4E9 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Cdt1Q8R4E9 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.63■□□□□ 0.25
Cdt1Q8R4E9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdt1Q8R4E9 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdt1Q8R4E9 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdt1Q8R4E9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.63■□□□□ 0.25
Cdt1Q8R4E9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdt1Q8R4E9 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.63■□□□□ 0.25
Cdt1Q8R4E9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdt1Q8R4E9 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.63■□□□□ 0.25
Cdt1Q8R4E9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdt1Q8R4E9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cdt1Q8R4E9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdt1Q8R4E9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdt1Q8R4E9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdt1Q8R4E9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdt1Q8R4E9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdt1Q8R4E9 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdt1Q8R4E9 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.62■□□□□ 0.25
Cdt1Q8R4E9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cdt1Q8R4E9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.62■□□□□ 0.25
Cdt1Q8R4E9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdt1Q8R4E9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.62■□□□□ 0.25
Cdt1Q8R4E9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cdt1Q8R4E9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdt1Q8R4E9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdt1Q8R4E9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdt1Q8R4E9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.62■□□□□ 0.25
Cdt1Q8R4E9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdt1Q8R4E9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cdt1Q8R4E9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms