Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.82■□□□□ 0.76
Pdlim2Q8R1G6 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pdlim2Q8R1G6 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pdlim2Q8R1G6 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pdlim2Q8R1G6 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Pdlim2Q8R1G6 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pdlim2Q8R1G6 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Pdlim2Q8R1G6 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.82■□□□□ 0.76
Pdlim2Q8R1G6 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pdlim2Q8R1G6 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pdlim2Q8R1G6 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pdlim2Q8R1G6 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pdlim2Q8R1G6 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pdlim2Q8R1G6 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pdlim2Q8R1G6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pdlim2Q8R1G6 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pdlim2Q8R1G6 AC154412.1-201ENSMUST00000226540 2786 ntBASIC19.81■□□□□ 0.76
Pdlim2Q8R1G6 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pdlim2Q8R1G6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pdlim2Q8R1G6 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Pdlim2Q8R1G6 Gm13146-201ENSMUST00000118508 780 ntBASIC19.81■□□□□ 0.76
Pdlim2Q8R1G6 Gm13534-201ENSMUST00000121169 513 ntBASIC19.81■□□□□ 0.76
Pdlim2Q8R1G6 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Pdlim2Q8R1G6 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.81■□□□□ 0.76
Pdlim2Q8R1G6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pdlim2Q8R1G6 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pdlim2Q8R1G6 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pdlim2Q8R1G6 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.81■□□□□ 0.76
Pdlim2Q8R1G6 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pdlim2Q8R1G6 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pdlim2Q8R1G6 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pdlim2Q8R1G6 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pdlim2Q8R1G6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pdlim2Q8R1G6 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.8■□□□□ 0.76
Pdlim2Q8R1G6 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.8■□□□□ 0.76
Pdlim2Q8R1G6 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pdlim2Q8R1G6 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pdlim2Q8R1G6 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Pdlim2Q8R1G6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Pdlim2Q8R1G6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pdlim2Q8R1G6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pdlim2Q8R1G6 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim2Q8R1G6 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim2Q8R1G6 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim2Q8R1G6 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim2Q8R1G6 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim2Q8R1G6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim2Q8R1G6 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim2Q8R1G6 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim2Q8R1G6 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim2Q8R1G6 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim2Q8R1G6 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim2Q8R1G6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pdlim2Q8R1G6 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pdlim2Q8R1G6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pdlim2Q8R1G6 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pdlim2Q8R1G6 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.78■□□□□ 0.76
Pdlim2Q8R1G6 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.78■□□□□ 0.76
Pdlim2Q8R1G6 Gm43060-201ENSMUST00000200621 289 ntBASIC19.78■□□□□ 0.76
Pdlim2Q8R1G6 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.78■□□□□ 0.76
Pdlim2Q8R1G6 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.78■□□□□ 0.76
Pdlim2Q8R1G6 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pdlim2Q8R1G6 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pdlim2Q8R1G6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.78■□□□□ 0.76
Pdlim2Q8R1G6 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pdlim2Q8R1G6 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pdlim2Q8R1G6 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Pdlim2Q8R1G6 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pdlim2Q8R1G6 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pdlim2Q8R1G6 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pdlim2Q8R1G6 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC19.77■□□□□ 0.76
Pdlim2Q8R1G6 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pdlim2Q8R1G6 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pdlim2Q8R1G6 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Pdlim2Q8R1G6 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pdlim2Q8R1G6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.77■□□□□ 0.76
Pdlim2Q8R1G6 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pdlim2Q8R1G6 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pdlim2Q8R1G6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
Pdlim2Q8R1G6 Gm37912-201ENSMUST00000191895 3076 ntBASIC19.77■□□□□ 0.76
Pdlim2Q8R1G6 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.76
Pdlim2Q8R1G6 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pdlim2Q8R1G6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pdlim2Q8R1G6 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Pdlim2Q8R1G6 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pdlim2Q8R1G6 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pdlim2Q8R1G6 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim2Q8R1G6 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim2Q8R1G6 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim2Q8R1G6 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.76■□□□□ 0.75
Pdlim2Q8R1G6 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim2Q8R1G6 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim2Q8R1G6 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim2Q8R1G6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim2Q8R1G6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim2Q8R1G6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Pdlim2Q8R1G6 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim2Q8R1G6 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim2Q8R1G6 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim2Q8R1G6 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms