Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sf3a1Q8K4Z5 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sf3a1Q8K4Z5 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sf3a1Q8K4Z5 Gm37025-201ENSMUST00000195159 829 ntBASIC21.06■□□□□ 0.96
Sf3a1Q8K4Z5 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sf3a1Q8K4Z5 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sf3a1Q8K4Z5 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sf3a1Q8K4Z5 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sf3a1Q8K4Z5 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sf3a1Q8K4Z5 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sf3a1Q8K4Z5 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sf3a1Q8K4Z5 Gm19439-201ENSMUST00000198195 2273 ntBASIC21.06■□□□□ 0.96
Sf3a1Q8K4Z5 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sf3a1Q8K4Z5 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC21.05■□□□□ 0.96
Sf3a1Q8K4Z5 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sf3a1Q8K4Z5 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
Sf3a1Q8K4Z5 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sf3a1Q8K4Z5 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sf3a1Q8K4Z5 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC21.05■□□□□ 0.96
Sf3a1Q8K4Z5 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sf3a1Q8K4Z5 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sf3a1Q8K4Z5 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
Sf3a1Q8K4Z5 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Sf3a1Q8K4Z5 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sf3a1Q8K4Z5 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC21.04■□□□□ 0.96
Sf3a1Q8K4Z5 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sf3a1Q8K4Z5 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sf3a1Q8K4Z5 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sf3a1Q8K4Z5 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.04■□□□□ 0.96
Sf3a1Q8K4Z5 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sf3a1Q8K4Z5 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC21.04■□□□□ 0.96
Sf3a1Q8K4Z5 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sf3a1Q8K4Z5 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC21.04■□□□□ 0.96
Sf3a1Q8K4Z5 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC21.04■□□□□ 0.96
Sf3a1Q8K4Z5 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sf3a1Q8K4Z5 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sf3a1Q8K4Z5 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
Sf3a1Q8K4Z5 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC21.04■□□□□ 0.96
Sf3a1Q8K4Z5 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sf3a1Q8K4Z5 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sf3a1Q8K4Z5 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sf3a1Q8K4Z5 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Sf3a1Q8K4Z5 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sf3a1Q8K4Z5 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sf3a1Q8K4Z5 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Sf3a1Q8K4Z5 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sf3a1Q8K4Z5 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sf3a1Q8K4Z5 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sf3a1Q8K4Z5 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sf3a1Q8K4Z5 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sf3a1Q8K4Z5 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC21.03■□□□□ 0.96
Sf3a1Q8K4Z5 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC21.03■□□□□ 0.96
Sf3a1Q8K4Z5 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Sf3a1Q8K4Z5 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC21.03■□□□□ 0.96
Sf3a1Q8K4Z5 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC21.03■□□□□ 0.96
Sf3a1Q8K4Z5 Gm30025-201ENSMUST00000218555 728 ntBASIC21.03■□□□□ 0.96
Sf3a1Q8K4Z5 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sf3a1Q8K4Z5 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sf3a1Q8K4Z5 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Sf3a1Q8K4Z5 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sf3a1Q8K4Z5 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sf3a1Q8K4Z5 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sf3a1Q8K4Z5 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC21.03■□□□□ 0.96
Sf3a1Q8K4Z5 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sf3a1Q8K4Z5 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC21.03■□□□□ 0.96
Sf3a1Q8K4Z5 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sf3a1Q8K4Z5 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sf3a1Q8K4Z5 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC21.02■□□□□ 0.96
Sf3a1Q8K4Z5 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sf3a1Q8K4Z5 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Sf3a1Q8K4Z5 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Sf3a1Q8K4Z5 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sf3a1Q8K4Z5 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Sf3a1Q8K4Z5 Gm17661-201ENSMUST00000170317 270 ntBASIC21.02■□□□□ 0.96
Sf3a1Q8K4Z5 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC21.02■□□□□ 0.96
Sf3a1Q8K4Z5 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sf3a1Q8K4Z5 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sf3a1Q8K4Z5 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Sf3a1Q8K4Z5 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sf3a1Q8K4Z5 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Sf3a1Q8K4Z5 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Sf3a1Q8K4Z5 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Sf3a1Q8K4Z5 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Sf3a1Q8K4Z5 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sf3a1Q8K4Z5 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC21.01■□□□□ 0.95
Sf3a1Q8K4Z5 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sf3a1Q8K4Z5 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC21.01■□□□□ 0.95
Sf3a1Q8K4Z5 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sf3a1Q8K4Z5 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Sf3a1Q8K4Z5 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC21.01■□□□□ 0.95
Sf3a1Q8K4Z5 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Sf3a1Q8K4Z5 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sf3a1Q8K4Z5 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC21.01■□□□□ 0.95
Sf3a1Q8K4Z5 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sf3a1Q8K4Z5 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Sf3a1Q8K4Z5 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sf3a1Q8K4Z5 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sf3a1Q8K4Z5 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sf3a1Q8K4Z5 Gm15565-201ENSMUST00000118890 427 ntBASIC21■□□□□ 0.95
Sf3a1Q8K4Z5 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms