Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clip4Q8CI96 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clip4Q8CI96 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clip4Q8CI96 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clip4Q8CI96 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clip4Q8CI96 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clip4Q8CI96 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clip4Q8CI96 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.32■□□□□ 0.36
Clip4Q8CI96 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.32■□□□□ 0.36
Clip4Q8CI96 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clip4Q8CI96 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clip4Q8CI96 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clip4Q8CI96 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clip4Q8CI96 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Clip4Q8CI96 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clip4Q8CI96 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clip4Q8CI96 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Clip4Q8CI96 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.32■□□□□ 0.36
Clip4Q8CI96 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clip4Q8CI96 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clip4Q8CI96 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clip4Q8CI96 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clip4Q8CI96 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clip4Q8CI96 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clip4Q8CI96 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Clip4Q8CI96 Mir6349-201ENSMUST00000184059 97 ntBASIC17.31■□□□□ 0.36
Clip4Q8CI96 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clip4Q8CI96 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Clip4Q8CI96 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clip4Q8CI96 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clip4Q8CI96 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clip4Q8CI96 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.31■□□□□ 0.36
Clip4Q8CI96 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clip4Q8CI96 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Clip4Q8CI96 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clip4Q8CI96 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Clip4Q8CI96 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Clip4Q8CI96 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clip4Q8CI96 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.3■□□□□ 0.36
Clip4Q8CI96 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.3■□□□□ 0.36
Clip4Q8CI96 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clip4Q8CI96 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Clip4Q8CI96 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.3■□□□□ 0.36
Clip4Q8CI96 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clip4Q8CI96 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clip4Q8CI96 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clip4Q8CI96 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clip4Q8CI96 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clip4Q8CI96 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clip4Q8CI96 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clip4Q8CI96 Gm6576-201ENSMUST00000169678 883 ntBASIC17.3■□□□□ 0.36
Clip4Q8CI96 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clip4Q8CI96 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clip4Q8CI96 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clip4Q8CI96 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.3■□□□□ 0.36
Clip4Q8CI96 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clip4Q8CI96 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clip4Q8CI96 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clip4Q8CI96 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.3■□□□□ 0.36
Clip4Q8CI96 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clip4Q8CI96 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clip4Q8CI96 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Clip4Q8CI96 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clip4Q8CI96 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clip4Q8CI96 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clip4Q8CI96 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.29■□□□□ 0.36
Clip4Q8CI96 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.29■□□□□ 0.36
Clip4Q8CI96 Gm18025-201ENSMUST00000221733 862 ntBASIC17.29■□□□□ 0.36
Clip4Q8CI96 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clip4Q8CI96 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clip4Q8CI96 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Clip4Q8CI96 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Clip4Q8CI96 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Clip4Q8CI96 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Clip4Q8CI96 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.29■□□□□ 0.36
Clip4Q8CI96 Idnk-204ENSMUST00000226010 1898 ntBASIC17.29■□□□□ 0.36
Clip4Q8CI96 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clip4Q8CI96 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.29■□□□□ 0.36
Clip4Q8CI96 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clip4Q8CI96 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.28■□□□□ 0.36
Clip4Q8CI96 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Clip4Q8CI96 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clip4Q8CI96 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clip4Q8CI96 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.28■□□□□ 0.36
Clip4Q8CI96 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clip4Q8CI96 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.28■□□□□ 0.36
Clip4Q8CI96 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.28■□□□□ 0.36
Clip4Q8CI96 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Clip4Q8CI96 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.28■□□□□ 0.36
Clip4Q8CI96 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clip4Q8CI96 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clip4Q8CI96 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.28■□□□□ 0.36
Clip4Q8CI96 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clip4Q8CI96 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clip4Q8CI96 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Clip4Q8CI96 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clip4Q8CI96 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clip4Q8CI96 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.28■□□□□ 0.36
Clip4Q8CI96 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clip4Q8CI96 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms