Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rab43Q8CG50 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Rab43Q8CG50 Gm11950-201ENSMUST00000121615 838 ntBASIC16.78■□□□□ 0.28
Rab43Q8CG50 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.78■□□□□ 0.28
Rab43Q8CG50 Gm17807-201ENSMUST00000186869 298 ntBASIC16.78■□□□□ 0.28
Rab43Q8CG50 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.78■□□□□ 0.28
Rab43Q8CG50 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rab43Q8CG50 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rab43Q8CG50 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rab43Q8CG50 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.78■□□□□ 0.28
Rab43Q8CG50 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rab43Q8CG50 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rab43Q8CG50 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.77■□□□□ 0.28
Rab43Q8CG50 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rab43Q8CG50 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rab43Q8CG50 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rab43Q8CG50 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rab43Q8CG50 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rab43Q8CG50 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.77■□□□□ 0.28
Rab43Q8CG50 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rab43Q8CG50 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rab43Q8CG50 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rab43Q8CG50 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Rab43Q8CG50 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rab43Q8CG50 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rab43Q8CG50 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rab43Q8CG50 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rab43Q8CG50 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.77■□□□□ 0.28
Rab43Q8CG50 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.77■□□□□ 0.28
Rab43Q8CG50 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rab43Q8CG50 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rab43Q8CG50 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rab43Q8CG50 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.77■□□□□ 0.28
Rab43Q8CG50 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
Rab43Q8CG50 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Rab43Q8CG50 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rab43Q8CG50 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Rab43Q8CG50 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab43Q8CG50 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab43Q8CG50 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Rab43Q8CG50 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rab43Q8CG50 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab43Q8CG50 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Rab43Q8CG50 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rab43Q8CG50 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.76■□□□□ 0.27
Rab43Q8CG50 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.76■□□□□ 0.27
Rab43Q8CG50 Mir8112-201ENSMUST00000184382 131 ntBASIC16.76■□□□□ 0.27
Rab43Q8CG50 Gm10566-201ENSMUST00000086739 996 ntBASIC16.76■□□□□ 0.27
Rab43Q8CG50 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rab43Q8CG50 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab43Q8CG50 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab43Q8CG50 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Rab43Q8CG50 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab43Q8CG50 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.76■□□□□ 0.27
Rab43Q8CG50 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab43Q8CG50 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rab43Q8CG50 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Rab43Q8CG50 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rab43Q8CG50 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rab43Q8CG50 Gm17971-201ENSMUST00000190239 806 ntBASIC16.75■□□□□ 0.27
Rab43Q8CG50 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Rab43Q8CG50 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rab43Q8CG50 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rab43Q8CG50 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rab43Q8CG50 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rab43Q8CG50 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Rab43Q8CG50 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rab43Q8CG50 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rab43Q8CG50 Actl10-202ENSMUST00000226583 1501 ntBASIC16.75■□□□□ 0.27
Rab43Q8CG50 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rab43Q8CG50 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rab43Q8CG50 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.74■□□□□ 0.27
Rab43Q8CG50 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rab43Q8CG50 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rab43Q8CG50 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Rab43Q8CG50 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rab43Q8CG50 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rab43Q8CG50 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rab43Q8CG50 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Rab43Q8CG50 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rab43Q8CG50 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rab43Q8CG50 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rab43Q8CG50 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.74■□□□□ 0.27
Rab43Q8CG50 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Rab43Q8CG50 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Rab43Q8CG50 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rab43Q8CG50 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Rab43Q8CG50 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rab43Q8CG50 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rab43Q8CG50 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rab43Q8CG50 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rab43Q8CG50 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Rab43Q8CG50 Gm6623-201ENSMUST00000173570 544 ntBASIC16.73■□□□□ 0.27
Rab43Q8CG50 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.73■□□□□ 0.27
Rab43Q8CG50 Gm18669-201ENSMUST00000216049 778 ntBASIC16.73■□□□□ 0.27
Rab43Q8CG50 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Rab43Q8CG50 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rab43Q8CG50 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Rab43Q8CG50 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rab43Q8CG50 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms