Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhb7Q8CDY9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdhb7Q8CDY9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.29■□□□□ 0.36
Pcdhb7Q8CDY9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb7Q8CDY9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb7Q8CDY9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb7Q8CDY9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb7Q8CDY9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb7Q8CDY9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb7Q8CDY9 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb7Q8CDY9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdhb7Q8CDY9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb7Q8CDY9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb7Q8CDY9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.29■□□□□ 0.36
Pcdhb7Q8CDY9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb7Q8CDY9 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhb7Q8CDY9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb7Q8CDY9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb7Q8CDY9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb7Q8CDY9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb7Q8CDY9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb7Q8CDY9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb7Q8CDY9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb7Q8CDY9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhb7Q8CDY9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb7Q8CDY9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb7Q8CDY9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhb7Q8CDY9 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.28■□□□□ 0.36
Pcdhb7Q8CDY9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb7Q8CDY9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb7Q8CDY9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb7Q8CDY9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb7Q8CDY9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdhb7Q8CDY9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb7Q8CDY9 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.28■□□□□ 0.36
Pcdhb7Q8CDY9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb7Q8CDY9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb7Q8CDY9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb7Q8CDY9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb7Q8CDY9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb7Q8CDY9 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb7Q8CDY9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb7Q8CDY9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb7Q8CDY9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb7Q8CDY9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb7Q8CDY9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb7Q8CDY9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb7Q8CDY9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
Pcdhb7Q8CDY9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.27■□□□□ 0.35
Pcdhb7Q8CDY9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhb7Q8CDY9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhb7Q8CDY9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhb7Q8CDY9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhb7Q8CDY9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhb7Q8CDY9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhb7Q8CDY9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb7Q8CDY9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Pcdhb7Q8CDY9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb7Q8CDY9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.26■□□□□ 0.35
Pcdhb7Q8CDY9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb7Q8CDY9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb7Q8CDY9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb7Q8CDY9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb7Q8CDY9 Gm11643-201ENSMUST00000119578 864 ntBASIC17.26■□□□□ 0.35
Pcdhb7Q8CDY9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb7Q8CDY9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb7Q8CDY9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.26■□□□□ 0.35
Pcdhb7Q8CDY9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Pcdhb7Q8CDY9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.26■□□□□ 0.35
Pcdhb7Q8CDY9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb7Q8CDY9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb7Q8CDY9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb7Q8CDY9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb7Q8CDY9 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.26■□□□□ 0.35
Pcdhb7Q8CDY9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Pcdhb7Q8CDY9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.26■□□□□ 0.35
Pcdhb7Q8CDY9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.26■□□□□ 0.35
Pcdhb7Q8CDY9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb7Q8CDY9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.26■□□□□ 0.35
Pcdhb7Q8CDY9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb7Q8CDY9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb7Q8CDY9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Pcdhb7Q8CDY9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb7Q8CDY9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb7Q8CDY9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb7Q8CDY9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb7Q8CDY9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Pcdhb7Q8CDY9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb7Q8CDY9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.25■□□□□ 0.35
Pcdhb7Q8CDY9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb7Q8CDY9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb7Q8CDY9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb7Q8CDY9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb7Q8CDY9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb7Q8CDY9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Pcdhb7Q8CDY9 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.25■□□□□ 0.35
Pcdhb7Q8CDY9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb7Q8CDY9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb7Q8CDY9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb7Q8CDY9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms