Protein–RNA interactions for Protein: Q8CCE9

E4f1, Transcription factor E4F1, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4f1Q8CCE9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
E4f1Q8CCE9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
E4f1Q8CCE9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
E4f1Q8CCE9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
E4f1Q8CCE9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
E4f1Q8CCE9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
E4f1Q8CCE9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
E4f1Q8CCE9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
E4f1Q8CCE9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
E4f1Q8CCE9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
E4f1Q8CCE9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
E4f1Q8CCE9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
E4f1Q8CCE9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
E4f1Q8CCE9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
E4f1Q8CCE9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
E4f1Q8CCE9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
E4f1Q8CCE9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
E4f1Q8CCE9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
E4f1Q8CCE9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
E4f1Q8CCE9 Gm10517-202ENSMUST00000192970 758 ntBASIC20.24■□□□□ 0.83
E4f1Q8CCE9 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
E4f1Q8CCE9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
E4f1Q8CCE9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
E4f1Q8CCE9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.24■□□□□ 0.83
E4f1Q8CCE9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
E4f1Q8CCE9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
E4f1Q8CCE9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
E4f1Q8CCE9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
E4f1Q8CCE9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
E4f1Q8CCE9 Gm20628-201ENSMUST00000177363 3215 ntBASIC20.23■□□□□ 0.83
E4f1Q8CCE9 Gm27463-201ENSMUST00000183569 57 ntBASIC20.23■□□□□ 0.83
E4f1Q8CCE9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
E4f1Q8CCE9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
E4f1Q8CCE9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
E4f1Q8CCE9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
E4f1Q8CCE9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
E4f1Q8CCE9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
E4f1Q8CCE9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
E4f1Q8CCE9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
E4f1Q8CCE9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.22■□□□□ 0.83
E4f1Q8CCE9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
E4f1Q8CCE9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
E4f1Q8CCE9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
E4f1Q8CCE9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
E4f1Q8CCE9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
E4f1Q8CCE9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
E4f1Q8CCE9 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
E4f1Q8CCE9 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
E4f1Q8CCE9 Gm23634-201ENSMUST00000175071 91 ntBASIC20.22■□□□□ 0.83
E4f1Q8CCE9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
E4f1Q8CCE9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
E4f1Q8CCE9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
E4f1Q8CCE9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
E4f1Q8CCE9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
E4f1Q8CCE9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
E4f1Q8CCE9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
E4f1Q8CCE9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
E4f1Q8CCE9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
E4f1Q8CCE9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
E4f1Q8CCE9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
E4f1Q8CCE9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
E4f1Q8CCE9 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
E4f1Q8CCE9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
E4f1Q8CCE9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
E4f1Q8CCE9 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
E4f1Q8CCE9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
E4f1Q8CCE9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
E4f1Q8CCE9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
E4f1Q8CCE9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
E4f1Q8CCE9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
E4f1Q8CCE9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.21■□□□□ 0.83
E4f1Q8CCE9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
E4f1Q8CCE9 Idnk-204ENSMUST00000226010 1898 ntBASIC20.21■□□□□ 0.83
E4f1Q8CCE9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
E4f1Q8CCE9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
E4f1Q8CCE9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
E4f1Q8CCE9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.83
E4f1Q8CCE9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
E4f1Q8CCE9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.2■□□□□ 0.82
E4f1Q8CCE9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
E4f1Q8CCE9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.2■□□□□ 0.82
E4f1Q8CCE9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
E4f1Q8CCE9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
E4f1Q8CCE9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
E4f1Q8CCE9 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
E4f1Q8CCE9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.2■□□□□ 0.82
E4f1Q8CCE9 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.2■□□□□ 0.82
E4f1Q8CCE9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.2■□□□□ 0.82
E4f1Q8CCE9 Gm45058-201ENSMUST00000205810 766 ntBASIC20.2■□□□□ 0.82
E4f1Q8CCE9 Gm18032-201ENSMUST00000222541 538 ntBASIC20.2■□□□□ 0.82
E4f1Q8CCE9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
E4f1Q8CCE9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
E4f1Q8CCE9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
E4f1Q8CCE9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
E4f1Q8CCE9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
E4f1Q8CCE9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
E4f1Q8CCE9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
E4f1Q8CCE9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
E4f1Q8CCE9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
E4f1Q8CCE9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms