Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc46a2Q8CA03 Gm10849-201ENSMUST00000100397 618 ntBASIC16.53■□□□□ 0.24
Slc46a2Q8CA03 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc46a2Q8CA03 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Slc46a2Q8CA03 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Slc46a2Q8CA03 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.53■□□□□ 0.24
Slc46a2Q8CA03 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc46a2Q8CA03 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc46a2Q8CA03 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc46a2Q8CA03 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Slc46a2Q8CA03 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc46a2Q8CA03 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Slc46a2Q8CA03 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc46a2Q8CA03 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc46a2Q8CA03 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Slc46a2Q8CA03 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc46a2Q8CA03 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc46a2Q8CA03 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc46a2Q8CA03 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Slc46a2Q8CA03 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc46a2Q8CA03 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc46a2Q8CA03 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc46a2Q8CA03 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc46a2Q8CA03 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc46a2Q8CA03 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc46a2Q8CA03 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Slc46a2Q8CA03 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc46a2Q8CA03 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Slc46a2Q8CA03 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.52■□□□□ 0.24
Slc46a2Q8CA03 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.52■□□□□ 0.24
Slc46a2Q8CA03 Gm10033-202ENSMUST00000211874 928 ntBASIC16.52■□□□□ 0.24
Slc46a2Q8CA03 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.52■□□□□ 0.24
Slc46a2Q8CA03 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc46a2Q8CA03 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Slc46a2Q8CA03 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Slc46a2Q8CA03 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc46a2Q8CA03 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Slc46a2Q8CA03 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Slc46a2Q8CA03 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Slc46a2Q8CA03 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Slc46a2Q8CA03 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Slc46a2Q8CA03 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc46a2Q8CA03 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc46a2Q8CA03 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc46a2Q8CA03 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Slc46a2Q8CA03 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slc46a2Q8CA03 Flg-201ENSMUST00000050758 1488 ntBASIC16.51■□□□□ 0.23
Slc46a2Q8CA03 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.51■□□□□ 0.23
Slc46a2Q8CA03 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.51■□□□□ 0.23
Slc46a2Q8CA03 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slc46a2Q8CA03 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.51■□□□□ 0.23
Slc46a2Q8CA03 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc46a2Q8CA03 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc46a2Q8CA03 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc46a2Q8CA03 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Slc46a2Q8CA03 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slc46a2Q8CA03 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc46a2Q8CA03 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.51■□□□□ 0.23
Slc46a2Q8CA03 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.51■□□□□ 0.23
Slc46a2Q8CA03 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc46a2Q8CA03 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Slc46a2Q8CA03 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Slc46a2Q8CA03 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc46a2Q8CA03 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Slc46a2Q8CA03 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.5■□□□□ 0.23
Slc46a2Q8CA03 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc46a2Q8CA03 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc46a2Q8CA03 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.5■□□□□ 0.23
Slc46a2Q8CA03 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc46a2Q8CA03 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc46a2Q8CA03 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Slc46a2Q8CA03 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc46a2Q8CA03 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Slc46a2Q8CA03 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc46a2Q8CA03 Gm44549-201ENSMUST00000208351 577 ntBASIC16.5■□□□□ 0.23
Slc46a2Q8CA03 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc46a2Q8CA03 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Slc46a2Q8CA03 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc46a2Q8CA03 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc46a2Q8CA03 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc46a2Q8CA03 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc46a2Q8CA03 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc46a2Q8CA03 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc46a2Q8CA03 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc46a2Q8CA03 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Slc46a2Q8CA03 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Slc46a2Q8CA03 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Slc46a2Q8CA03 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc46a2Q8CA03 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc46a2Q8CA03 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.49■□□□□ 0.23
Slc46a2Q8CA03 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc46a2Q8CA03 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc46a2Q8CA03 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc46a2Q8CA03 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc46a2Q8CA03 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.49■□□□□ 0.23
Slc46a2Q8CA03 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Slc46a2Q8CA03 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Slc46a2Q8CA03 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Slc46a2Q8CA03 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc46a2Q8CA03 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms