Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21.96■■□□□ 1.11
Ccdc60Q8C4J0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ccdc60Q8C4J0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Ccdc60Q8C4J0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Ccdc60Q8C4J0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ccdc60Q8C4J0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ccdc60Q8C4J0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Ccdc60Q8C4J0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ccdc60Q8C4J0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ccdc60Q8C4J0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Ccdc60Q8C4J0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ccdc60Q8C4J0 Gm15565-201ENSMUST00000118890 427 ntBASIC21.95■■□□□ 1.1
Ccdc60Q8C4J0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC21.95■■□□□ 1.1
Ccdc60Q8C4J0 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ccdc60Q8C4J0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
Ccdc60Q8C4J0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ccdc60Q8C4J0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ccdc60Q8C4J0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC21.95■■□□□ 1.1
Ccdc60Q8C4J0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ccdc60Q8C4J0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ccdc60Q8C4J0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ccdc60Q8C4J0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ccdc60Q8C4J0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ccdc60Q8C4J0 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ccdc60Q8C4J0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
Ccdc60Q8C4J0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ccdc60Q8C4J0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ccdc60Q8C4J0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
Ccdc60Q8C4J0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC21.94■■□□□ 1.1
Ccdc60Q8C4J0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Ccdc60Q8C4J0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ccdc60Q8C4J0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC21.94■■□□□ 1.1
Ccdc60Q8C4J0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ccdc60Q8C4J0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ccdc60Q8C4J0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Ccdc60Q8C4J0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ccdc60Q8C4J0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ccdc60Q8C4J0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ccdc60Q8C4J0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC21.93■■□□□ 1.1
Ccdc60Q8C4J0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ccdc60Q8C4J0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ccdc60Q8C4J0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Ccdc60Q8C4J0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Ccdc60Q8C4J0 Gm43353-201ENSMUST00000199224 1295 ntBASIC21.93■■□□□ 1.1
Ccdc60Q8C4J0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC21.93■■□□□ 1.1
Ccdc60Q8C4J0 Gm16499-203ENSMUST00000204633 2177 ntBASIC21.93■■□□□ 1.1
Ccdc60Q8C4J0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ccdc60Q8C4J0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ccdc60Q8C4J0 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ccdc60Q8C4J0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ccdc60Q8C4J0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Ccdc60Q8C4J0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ccdc60Q8C4J0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ccdc60Q8C4J0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc60Q8C4J0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc60Q8C4J0 Gm10461-201ENSMUST00000202073 4786 ntBASIC21.92■■□□□ 1.1
Ccdc60Q8C4J0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC21.92■■□□□ 1.1
Ccdc60Q8C4J0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc60Q8C4J0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc60Q8C4J0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc60Q8C4J0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc60Q8C4J0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc60Q8C4J0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc60Q8C4J0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc60Q8C4J0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc60Q8C4J0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC21.92■■□□□ 1.1
Ccdc60Q8C4J0 Gm11539-201ENSMUST00000119837 557 ntBASIC21.92■■□□□ 1.1
Ccdc60Q8C4J0 Gm13436-201ENSMUST00000120418 567 ntBASIC21.92■■□□□ 1.1
Ccdc60Q8C4J0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc60Q8C4J0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC21.92■■□□□ 1.1
Ccdc60Q8C4J0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC21.92■■□□□ 1.1
Ccdc60Q8C4J0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc60Q8C4J0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc60Q8C4J0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
Ccdc60Q8C4J0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc60Q8C4J0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc60Q8C4J0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc60Q8C4J0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc60Q8C4J0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc60Q8C4J0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc60Q8C4J0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc60Q8C4J0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc60Q8C4J0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc60Q8C4J0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc60Q8C4J0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc60Q8C4J0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC21.91■■□□□ 1.1
Ccdc60Q8C4J0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC21.91■■□□□ 1.1
Ccdc60Q8C4J0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc60Q8C4J0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc60Q8C4J0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Ccdc60Q8C4J0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC21.91■■□□□ 1.1
Ccdc60Q8C4J0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc60Q8C4J0 Gm6598-201ENSMUST00000202719 2615 ntBASIC21.91■■□□□ 1.1
Ccdc60Q8C4J0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ccdc60Q8C4J0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ccdc60Q8C4J0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ccdc60Q8C4J0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ccdc60Q8C4J0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC21.9■■□□□ 1.1
Ccdc60Q8C4J0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ccdc60Q8C4J0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms