Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Vps9d1Q8C190 Gm2399-201ENSMUST00000104944 225 ntBASIC16.13■□□□□ 0.17
Vps9d1Q8C190 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.13■□□□□ 0.17
Vps9d1Q8C190 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps9d1Q8C190 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps9d1Q8C190 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.13■□□□□ 0.17
Vps9d1Q8C190 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps9d1Q8C190 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps9d1Q8C190 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.13■□□□□ 0.17
Vps9d1Q8C190 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps9d1Q8C190 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Vps9d1Q8C190 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps9d1Q8C190 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps9d1Q8C190 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vps9d1Q8C190 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps9d1Q8C190 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Vps9d1Q8C190 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vps9d1Q8C190 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps9d1Q8C190 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps9d1Q8C190 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.12■□□□□ 0.17
Vps9d1Q8C190 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps9d1Q8C190 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps9d1Q8C190 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.12■□□□□ 0.17
Vps9d1Q8C190 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Vps9d1Q8C190 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.12■□□□□ 0.17
Vps9d1Q8C190 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps9d1Q8C190 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.12■□□□□ 0.17
Vps9d1Q8C190 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vps9d1Q8C190 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps9d1Q8C190 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps9d1Q8C190 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps9d1Q8C190 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.12■□□□□ 0.17
Vps9d1Q8C190 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps9d1Q8C190 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps9d1Q8C190 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps9d1Q8C190 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Vps9d1Q8C190 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps9d1Q8C190 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps9d1Q8C190 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps9d1Q8C190 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vps9d1Q8C190 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps9d1Q8C190 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps9d1Q8C190 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps9d1Q8C190 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps9d1Q8C190 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps9d1Q8C190 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps9d1Q8C190 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps9d1Q8C190 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.11■□□□□ 0.17
Vps9d1Q8C190 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps9d1Q8C190 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vps9d1Q8C190 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.11■□□□□ 0.17
Vps9d1Q8C190 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vps9d1Q8C190 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.11■□□□□ 0.17
Vps9d1Q8C190 Mir8112-201ENSMUST00000184382 131 ntBASIC16.11■□□□□ 0.17
Vps9d1Q8C190 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.11■□□□□ 0.17
Vps9d1Q8C190 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps9d1Q8C190 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vps9d1Q8C190 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps9d1Q8C190 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Vps9d1Q8C190 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Vps9d1Q8C190 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps9d1Q8C190 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.11■□□□□ 0.17
Vps9d1Q8C190 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps9d1Q8C190 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vps9d1Q8C190 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps9d1Q8C190 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vps9d1Q8C190 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps9d1Q8C190 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Vps9d1Q8C190 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps9d1Q8C190 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vps9d1Q8C190 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.1■□□□□ 0.17
Vps9d1Q8C190 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Vps9d1Q8C190 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vps9d1Q8C190 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vps9d1Q8C190 Rab3c-203ENSMUST00000224180 967 ntBASIC16.1■□□□□ 0.17
Vps9d1Q8C190 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps9d1Q8C190 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.1■□□□□ 0.17
Vps9d1Q8C190 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps9d1Q8C190 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps9d1Q8C190 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps9d1Q8C190 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vps9d1Q8C190 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Vps9d1Q8C190 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps9d1Q8C190 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Vps9d1Q8C190 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.1■□□□□ 0.17
Vps9d1Q8C190 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps9d1Q8C190 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps9d1Q8C190 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.1■□□□□ 0.17
Vps9d1Q8C190 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps9d1Q8C190 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps9d1Q8C190 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps9d1Q8C190 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps9d1Q8C190 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Vps9d1Q8C190 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps9d1Q8C190 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps9d1Q8C190 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps9d1Q8C190 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Vps9d1Q8C190 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps9d1Q8C190 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.09■□□□□ 0.17
Vps9d1Q8C190 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms