Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cdk5rap1Q8BTW8 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.34■□□□□ 0.21
Cdk5rap1Q8BTW8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Cdk5rap1Q8BTW8 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.34■□□□□ 0.21
Cdk5rap1Q8BTW8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdk5rap1Q8BTW8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdk5rap1Q8BTW8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cdk5rap1Q8BTW8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdk5rap1Q8BTW8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cdk5rap1Q8BTW8 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdk5rap1Q8BTW8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.34■□□□□ 0.21
Cdk5rap1Q8BTW8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdk5rap1Q8BTW8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdk5rap1Q8BTW8 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.34■□□□□ 0.21
Cdk5rap1Q8BTW8 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.34■□□□□ 0.21
Cdk5rap1Q8BTW8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdk5rap1Q8BTW8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdk5rap1Q8BTW8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Cdk5rap1Q8BTW8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdk5rap1Q8BTW8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Cdk5rap1Q8BTW8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdk5rap1Q8BTW8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdk5rap1Q8BTW8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.33■□□□□ 0.2
Cdk5rap1Q8BTW8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdk5rap1Q8BTW8 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
Cdk5rap1Q8BTW8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.33■□□□□ 0.2
Cdk5rap1Q8BTW8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.33■□□□□ 0.2
Cdk5rap1Q8BTW8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdk5rap1Q8BTW8 Gm23634-201ENSMUST00000175071 91 ntBASIC16.33■□□□□ 0.2
Cdk5rap1Q8BTW8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cdk5rap1Q8BTW8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Cdk5rap1Q8BTW8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdk5rap1Q8BTW8 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.33■□□□□ 0.2
Cdk5rap1Q8BTW8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdk5rap1Q8BTW8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.33■□□□□ 0.2
Cdk5rap1Q8BTW8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdk5rap1Q8BTW8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdk5rap1Q8BTW8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.33■□□□□ 0.2
Cdk5rap1Q8BTW8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdk5rap1Q8BTW8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdk5rap1Q8BTW8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Cdk5rap1Q8BTW8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cdk5rap1Q8BTW8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdk5rap1Q8BTW8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Cdk5rap1Q8BTW8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdk5rap1Q8BTW8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cdk5rap1Q8BTW8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdk5rap1Q8BTW8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cdk5rap1Q8BTW8 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cdk5rap1Q8BTW8 Mir1668-201ENSMUST00000184114 107 ntBASIC16.32■□□□□ 0.2
Cdk5rap1Q8BTW8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.32■□□□□ 0.2
Cdk5rap1Q8BTW8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdk5rap1Q8BTW8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdk5rap1Q8BTW8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cdk5rap1Q8BTW8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdk5rap1Q8BTW8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdk5rap1Q8BTW8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdk5rap1Q8BTW8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdk5rap1Q8BTW8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cdk5rap1Q8BTW8 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdk5rap1Q8BTW8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cdk5rap1Q8BTW8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdk5rap1Q8BTW8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdk5rap1Q8BTW8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cdk5rap1Q8BTW8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdk5rap1Q8BTW8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdk5rap1Q8BTW8 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdk5rap1Q8BTW8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdk5rap1Q8BTW8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdk5rap1Q8BTW8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cdk5rap1Q8BTW8 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdk5rap1Q8BTW8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdk5rap1Q8BTW8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
Cdk5rap1Q8BTW8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.3■□□□□ 0.2
Cdk5rap1Q8BTW8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Cdk5rap1Q8BTW8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdk5rap1Q8BTW8 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.3■□□□□ 0.2
Cdk5rap1Q8BTW8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Cdk5rap1Q8BTW8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdk5rap1Q8BTW8 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.3■□□□□ 0.2
Cdk5rap1Q8BTW8 AA414768-201ENSMUST00000121924 1257 ntBASIC16.3■□□□□ 0.2
Cdk5rap1Q8BTW8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.3■□□□□ 0.2
Cdk5rap1Q8BTW8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdk5rap1Q8BTW8 Gm27389-201ENSMUST00000183622 195 ntBASIC16.3■□□□□ 0.2
Cdk5rap1Q8BTW8 Gm7213-201ENSMUST00000215977 950 ntBASIC16.3■□□□□ 0.2
Cdk5rap1Q8BTW8 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdk5rap1Q8BTW8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdk5rap1Q8BTW8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdk5rap1Q8BTW8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdk5rap1Q8BTW8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.29■□□□□ 0.2
Cdk5rap1Q8BTW8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdk5rap1Q8BTW8 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cdk5rap1Q8BTW8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.29■□□□□ 0.2
Cdk5rap1Q8BTW8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdk5rap1Q8BTW8 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdk5rap1Q8BTW8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdk5rap1Q8BTW8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdk5rap1Q8BTW8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdk5rap1Q8BTW8 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.29■□□□□ 0.2
Cdk5rap1Q8BTW8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms