Protein–RNA interactions for Protein: Q8BPK2

Zcchc3, Zinc finger, CCHC domain-containing 3, mousemouse

Known RBP Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc3Q8BPK2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Zcchc3Q8BPK2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Zcchc3Q8BPK2 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.2■□□□□ 0.18
Zcchc3Q8BPK2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Zcchc3Q8BPK2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Zcchc3Q8BPK2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Zcchc3Q8BPK2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Zcchc3Q8BPK2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Zcchc3Q8BPK2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Zcchc3Q8BPK2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Zcchc3Q8BPK2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Zcchc3Q8BPK2 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Zcchc3Q8BPK2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Zcchc3Q8BPK2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Zcchc3Q8BPK2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Zcchc3Q8BPK2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Zcchc3Q8BPK2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.19■□□□□ 0.18
Zcchc3Q8BPK2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.19■□□□□ 0.18
Zcchc3Q8BPK2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Zcchc3Q8BPK2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Zcchc3Q8BPK2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Zcchc3Q8BPK2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Zcchc3Q8BPK2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Zcchc3Q8BPK2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Zcchc3Q8BPK2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Zcchc3Q8BPK2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Zcchc3Q8BPK2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zcchc3Q8BPK2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zcchc3Q8BPK2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zcchc3Q8BPK2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Zcchc3Q8BPK2 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zcchc3Q8BPK2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zcchc3Q8BPK2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.18■□□□□ 0.18
Zcchc3Q8BPK2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.18■□□□□ 0.18
Zcchc3Q8BPK2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zcchc3Q8BPK2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zcchc3Q8BPK2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Zcchc3Q8BPK2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zcchc3Q8BPK2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Zcchc3Q8BPK2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zcchc3Q8BPK2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Zcchc3Q8BPK2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zcchc3Q8BPK2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Zcchc3Q8BPK2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zcchc3Q8BPK2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Zcchc3Q8BPK2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zcchc3Q8BPK2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.18■□□□□ 0.18
Zcchc3Q8BPK2 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Zcchc3Q8BPK2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.18■□□□□ 0.18
Zcchc3Q8BPK2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc3Q8BPK2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc3Q8BPK2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc3Q8BPK2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc3Q8BPK2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc3Q8BPK2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc3Q8BPK2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Zcchc3Q8BPK2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc3Q8BPK2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.17■□□□□ 0.18
Zcchc3Q8BPK2 Gm4974-201ENSMUST00000209974 875 ntBASIC16.17■□□□□ 0.18
Zcchc3Q8BPK2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.17■□□□□ 0.18
Zcchc3Q8BPK2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc3Q8BPK2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.17■□□□□ 0.18
Zcchc3Q8BPK2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Zcchc3Q8BPK2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Zcchc3Q8BPK2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc3Q8BPK2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Zcchc3Q8BPK2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Zcchc3Q8BPK2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.16■□□□□ 0.18
Zcchc3Q8BPK2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc3Q8BPK2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Zcchc3Q8BPK2 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc3Q8BPK2 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Zcchc3Q8BPK2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc3Q8BPK2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.16■□□□□ 0.18
Zcchc3Q8BPK2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc3Q8BPK2 Gm5643-201ENSMUST00000117081 966 ntBASIC16.16■□□□□ 0.18
Zcchc3Q8BPK2 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.16■□□□□ 0.18
Zcchc3Q8BPK2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Zcchc3Q8BPK2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc3Q8BPK2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc3Q8BPK2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Zcchc3Q8BPK2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Zcchc3Q8BPK2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc3Q8BPK2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc3Q8BPK2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc3Q8BPK2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc3Q8BPK2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc3Q8BPK2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc3Q8BPK2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc3Q8BPK2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc3Q8BPK2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc3Q8BPK2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc3Q8BPK2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.15■□□□□ 0.18
Zcchc3Q8BPK2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc3Q8BPK2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc3Q8BPK2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.15■□□□□ 0.18
Zcchc3Q8BPK2 Gm43183-201ENSMUST00000200632 547 ntBASIC16.15■□□□□ 0.18
Zcchc3Q8BPK2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Zcchc3Q8BPK2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Zcchc3Q8BPK2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms