Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smg1Q8BKX6 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Smg1Q8BKX6 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Smg1Q8BKX6 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Smg1Q8BKX6 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smg1Q8BKX6 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.58□□□□□ -0.08
Smg1Q8BKX6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.58□□□□□ -0.08
Smg1Q8BKX6 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Smg1Q8BKX6 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.58□□□□□ -0.08
Smg1Q8BKX6 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smg1Q8BKX6 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Smg1Q8BKX6 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smg1Q8BKX6 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smg1Q8BKX6 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Smg1Q8BKX6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smg1Q8BKX6 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smg1Q8BKX6 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smg1Q8BKX6 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smg1Q8BKX6 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.57□□□□□ -0.08
Smg1Q8BKX6 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smg1Q8BKX6 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Smg1Q8BKX6 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Smg1Q8BKX6 Gm43006-201ENSMUST00000197702 1602 ntBASIC14.57□□□□□ -0.08
Smg1Q8BKX6 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smg1Q8BKX6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smg1Q8BKX6 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.57□□□□□ -0.08
Smg1Q8BKX6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Smg1Q8BKX6 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.56□□□□□ -0.08
Smg1Q8BKX6 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.56□□□□□ -0.08
Smg1Q8BKX6 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smg1Q8BKX6 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smg1Q8BKX6 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smg1Q8BKX6 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smg1Q8BKX6 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smg1Q8BKX6 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smg1Q8BKX6 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smg1Q8BKX6 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smg1Q8BKX6 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.56□□□□□ -0.08
Smg1Q8BKX6 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smg1Q8BKX6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smg1Q8BKX6 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smg1Q8BKX6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Smg1Q8BKX6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smg1Q8BKX6 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smg1Q8BKX6 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smg1Q8BKX6 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.56□□□□□ -0.08
Smg1Q8BKX6 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Smg1Q8BKX6 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smg1Q8BKX6 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smg1Q8BKX6 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smg1Q8BKX6 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smg1Q8BKX6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Smg1Q8BKX6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Smg1Q8BKX6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Smg1Q8BKX6 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smg1Q8BKX6 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smg1Q8BKX6 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smg1Q8BKX6 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smg1Q8BKX6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smg1Q8BKX6 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smg1Q8BKX6 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.55□□□□□ -0.08
Smg1Q8BKX6 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smg1Q8BKX6 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smg1Q8BKX6 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smg1Q8BKX6 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smg1Q8BKX6 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smg1Q8BKX6 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.55□□□□□ -0.08
Smg1Q8BKX6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Smg1Q8BKX6 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smg1Q8BKX6 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smg1Q8BKX6 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.54□□□□□ -0.08
Smg1Q8BKX6 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smg1Q8BKX6 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.54□□□□□ -0.08
Smg1Q8BKX6 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smg1Q8BKX6 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smg1Q8BKX6 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smg1Q8BKX6 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smg1Q8BKX6 Gm13401-201ENSMUST00000117074 291 ntBASIC14.54□□□□□ -0.08
Smg1Q8BKX6 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.54□□□□□ -0.08
Smg1Q8BKX6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smg1Q8BKX6 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.54□□□□□ -0.08
Smg1Q8BKX6 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smg1Q8BKX6 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smg1Q8BKX6 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Smg1Q8BKX6 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.54□□□□□ -0.08
Smg1Q8BKX6 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Smg1Q8BKX6 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Smg1Q8BKX6 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smg1Q8BKX6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
Smg1Q8BKX6 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smg1Q8BKX6 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smg1Q8BKX6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smg1Q8BKX6 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smg1Q8BKX6 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smg1Q8BKX6 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smg1Q8BKX6 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.53□□□□□ -0.08
Smg1Q8BKX6 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smg1Q8BKX6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smg1Q8BKX6 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smg1Q8BKX6 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms