Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc40Q8BI79 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc40Q8BI79 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc40Q8BI79 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc40Q8BI79 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc40Q8BI79 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc40Q8BI79 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc40Q8BI79 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc40Q8BI79 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc40Q8BI79 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc40Q8BI79 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc40Q8BI79 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.93■□□□□ 0.46
Ccdc40Q8BI79 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc40Q8BI79 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc40Q8BI79 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc40Q8BI79 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc40Q8BI79 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc40Q8BI79 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Ccdc40Q8BI79 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Ccdc40Q8BI79 Gm18666-201ENSMUST00000190039 958 ntBASIC17.93■□□□□ 0.46
Ccdc40Q8BI79 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Ccdc40Q8BI79 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc40Q8BI79 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Ccdc40Q8BI79 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc40Q8BI79 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc40Q8BI79 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc40Q8BI79 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc40Q8BI79 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.93■□□□□ 0.46
Ccdc40Q8BI79 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.93■□□□□ 0.46
Ccdc40Q8BI79 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc40Q8BI79 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.93■□□□□ 0.46
Ccdc40Q8BI79 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc40Q8BI79 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Ccdc40Q8BI79 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc40Q8BI79 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ccdc40Q8BI79 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc40Q8BI79 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc40Q8BI79 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc40Q8BI79 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.92■□□□□ 0.46
Ccdc40Q8BI79 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc40Q8BI79 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc40Q8BI79 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc40Q8BI79 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc40Q8BI79 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc40Q8BI79 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc40Q8BI79 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc40Q8BI79 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc40Q8BI79 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc40Q8BI79 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc40Q8BI79 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc40Q8BI79 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc40Q8BI79 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc40Q8BI79 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc40Q8BI79 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.91■□□□□ 0.46
Ccdc40Q8BI79 Gm12527-201ENSMUST00000117967 564 ntBASIC17.91■□□□□ 0.46
Ccdc40Q8BI79 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc40Q8BI79 Mir8112-201ENSMUST00000184382 131 ntBASIC17.91■□□□□ 0.46
Ccdc40Q8BI79 Trmt13-210ENSMUST00000198454 880 ntBASIC17.91■□□□□ 0.46
Ccdc40Q8BI79 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc40Q8BI79 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.91■□□□□ 0.46
Ccdc40Q8BI79 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Ccdc40Q8BI79 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
Ccdc40Q8BI79 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ccdc40Q8BI79 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc40Q8BI79 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc40Q8BI79 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc40Q8BI79 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc40Q8BI79 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ccdc40Q8BI79 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc40Q8BI79 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc40Q8BI79 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ccdc40Q8BI79 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc40Q8BI79 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc40Q8BI79 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.9■□□□□ 0.46
Ccdc40Q8BI79 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc40Q8BI79 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Ccdc40Q8BI79 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc40Q8BI79 Gm37856-201ENSMUST00000191634 999 ntBASIC17.9■□□□□ 0.46
Ccdc40Q8BI79 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc40Q8BI79 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc40Q8BI79 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc40Q8BI79 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc40Q8BI79 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.9■□□□□ 0.46
Ccdc40Q8BI79 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc40Q8BI79 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc40Q8BI79 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc40Q8BI79 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Ccdc40Q8BI79 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc40Q8BI79 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc40Q8BI79 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc40Q8BI79 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc40Q8BI79 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc40Q8BI79 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc40Q8BI79 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc40Q8BI79 Gm13401-201ENSMUST00000117074 291 ntBASIC17.89■□□□□ 0.45
Ccdc40Q8BI79 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc40Q8BI79 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc40Q8BI79 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc40Q8BI79 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.89■□□□□ 0.45
Ccdc40Q8BI79 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms