Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp38Q80UU2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp38Q80UU2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Rpp38Q80UU2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp38Q80UU2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp38Q80UU2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rpp38Q80UU2 Gm7791-201ENSMUST00000219066 539 ntBASIC17.18■□□□□ 0.34
Rpp38Q80UU2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp38Q80UU2 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.18■□□□□ 0.34
Rpp38Q80UU2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp38Q80UU2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp38Q80UU2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp38Q80UU2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp38Q80UU2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.18■□□□□ 0.34
Rpp38Q80UU2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rpp38Q80UU2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpp38Q80UU2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpp38Q80UU2 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpp38Q80UU2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpp38Q80UU2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.17■□□□□ 0.34
Rpp38Q80UU2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rpp38Q80UU2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.17■□□□□ 0.34
Rpp38Q80UU2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpp38Q80UU2 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.17■□□□□ 0.34
Rpp38Q80UU2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.17■□□□□ 0.34
Rpp38Q80UU2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpp38Q80UU2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpp38Q80UU2 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpp38Q80UU2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpp38Q80UU2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpp38Q80UU2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Rpp38Q80UU2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Rpp38Q80UU2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpp38Q80UU2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Rpp38Q80UU2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.16■□□□□ 0.34
Rpp38Q80UU2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rpp38Q80UU2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rpp38Q80UU2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpp38Q80UU2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpp38Q80UU2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
Rpp38Q80UU2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Rpp38Q80UU2 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.16■□□□□ 0.34
Rpp38Q80UU2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.16■□□□□ 0.34
Rpp38Q80UU2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpp38Q80UU2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpp38Q80UU2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpp38Q80UU2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Rpp38Q80UU2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpp38Q80UU2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpp38Q80UU2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Rpp38Q80UU2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpp38Q80UU2 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpp38Q80UU2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpp38Q80UU2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rpp38Q80UU2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Rpp38Q80UU2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Rpp38Q80UU2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Rpp38Q80UU2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rpp38Q80UU2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpp38Q80UU2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rpp38Q80UU2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.15■□□□□ 0.34
Rpp38Q80UU2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpp38Q80UU2 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpp38Q80UU2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.15■□□□□ 0.34
Rpp38Q80UU2 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rpp38Q80UU2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rpp38Q80UU2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpp38Q80UU2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpp38Q80UU2 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpp38Q80UU2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rpp38Q80UU2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Rpp38Q80UU2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Rpp38Q80UU2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.14■□□□□ 0.33
Rpp38Q80UU2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpp38Q80UU2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpp38Q80UU2 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.14■□□□□ 0.33
Rpp38Q80UU2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpp38Q80UU2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpp38Q80UU2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpp38Q80UU2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpp38Q80UU2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rpp38Q80UU2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.14■□□□□ 0.33
Rpp38Q80UU2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpp38Q80UU2 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.14■□□□□ 0.33
Rpp38Q80UU2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.14■□□□□ 0.33
Rpp38Q80UU2 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rpp38Q80UU2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rpp38Q80UU2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpp38Q80UU2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpp38Q80UU2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rpp38Q80UU2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpp38Q80UU2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rpp38Q80UU2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpp38Q80UU2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpp38Q80UU2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpp38Q80UU2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpp38Q80UU2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpp38Q80UU2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpp38Q80UU2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpp38Q80UU2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms