Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf38bQ80SY5 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf38bQ80SY5 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf38bQ80SY5 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.94■□□□□ 0.46
Prpf38bQ80SY5 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf38bQ80SY5 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf38bQ80SY5 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Prpf38bQ80SY5 Gm9013-201ENSMUST00000132939 882 ntBASIC17.94■□□□□ 0.46
Prpf38bQ80SY5 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Prpf38bQ80SY5 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.94■□□□□ 0.46
Prpf38bQ80SY5 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf38bQ80SY5 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf38bQ80SY5 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf38bQ80SY5 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf38bQ80SY5 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf38bQ80SY5 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf38bQ80SY5 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38bQ80SY5 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38bQ80SY5 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38bQ80SY5 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38bQ80SY5 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Prpf38bQ80SY5 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38bQ80SY5 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38bQ80SY5 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.93■□□□□ 0.46
Prpf38bQ80SY5 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38bQ80SY5 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38bQ80SY5 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Prpf38bQ80SY5 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38bQ80SY5 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.93■□□□□ 0.46
Prpf38bQ80SY5 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38bQ80SY5 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Prpf38bQ80SY5 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38bQ80SY5 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38bQ80SY5 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Prpf38bQ80SY5 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38bQ80SY5 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38bQ80SY5 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38bQ80SY5 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Prpf38bQ80SY5 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38bQ80SY5 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38bQ80SY5 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38bQ80SY5 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38bQ80SY5 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38bQ80SY5 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38bQ80SY5 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38bQ80SY5 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38bQ80SY5 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38bQ80SY5 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38bQ80SY5 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38bQ80SY5 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38bQ80SY5 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Prpf38bQ80SY5 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38bQ80SY5 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38bQ80SY5 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.92■□□□□ 0.46
Prpf38bQ80SY5 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38bQ80SY5 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.92■□□□□ 0.46
Prpf38bQ80SY5 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38bQ80SY5 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.92■□□□□ 0.46
Prpf38bQ80SY5 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38bQ80SY5 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38bQ80SY5 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.92■□□□□ 0.46
Prpf38bQ80SY5 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38bQ80SY5 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf38bQ80SY5 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf38bQ80SY5 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf38bQ80SY5 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.91■□□□□ 0.46
Prpf38bQ80SY5 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf38bQ80SY5 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.91■□□□□ 0.46
Prpf38bQ80SY5 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.91■□□□□ 0.46
Prpf38bQ80SY5 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf38bQ80SY5 Gm16061-201ENSMUST00000122167 857 ntBASIC17.91■□□□□ 0.46
Prpf38bQ80SY5 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.91■□□□□ 0.46
Prpf38bQ80SY5 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf38bQ80SY5 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Prpf38bQ80SY5 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Prpf38bQ80SY5 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.91■□□□□ 0.46
Prpf38bQ80SY5 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Prpf38bQ80SY5 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.91■□□□□ 0.46
Prpf38bQ80SY5 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.91■□□□□ 0.46
Prpf38bQ80SY5 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.91■□□□□ 0.46
Prpf38bQ80SY5 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.91■□□□□ 0.46
Prpf38bQ80SY5 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.91■□□□□ 0.46
Prpf38bQ80SY5 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf38bQ80SY5 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf38bQ80SY5 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf38bQ80SY5 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf38bQ80SY5 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
Prpf38bQ80SY5 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf38bQ80SY5 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf38bQ80SY5 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.91■□□□□ 0.46
Prpf38bQ80SY5 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf38bQ80SY5 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf38bQ80SY5 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf38bQ80SY5 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Prpf38bQ80SY5 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf38bQ80SY5 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Prpf38bQ80SY5 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf38bQ80SY5 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.9■□□□□ 0.46
Prpf38bQ80SY5 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf38bQ80SY5 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms