Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sned1Q70E20 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sned1Q70E20 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sned1Q70E20 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Sned1Q70E20 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.84■□□□□ 0.93
Sned1Q70E20 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sned1Q70E20 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sned1Q70E20 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sned1Q70E20 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sned1Q70E20 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Sned1Q70E20 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sned1Q70E20 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sned1Q70E20 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sned1Q70E20 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Sned1Q70E20 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC20.83■□□□□ 0.93
Sned1Q70E20 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Sned1Q70E20 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sned1Q70E20 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sned1Q70E20 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Sned1Q70E20 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Sned1Q70E20 AC131586.3-201ENSMUST00000228355 1367 ntBASIC20.82■□□□□ 0.92
Sned1Q70E20 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sned1Q70E20 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sned1Q70E20 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
Sned1Q70E20 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Sned1Q70E20 Gm25990-201ENSMUST00000102440 86 ntBASIC20.82■□□□□ 0.92
Sned1Q70E20 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC20.82■□□□□ 0.92
Sned1Q70E20 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC20.82■□□□□ 0.92
Sned1Q70E20 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC20.82■□□□□ 0.92
Sned1Q70E20 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC20.82■□□□□ 0.92
Sned1Q70E20 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sned1Q70E20 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sned1Q70E20 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Sned1Q70E20 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sned1Q70E20 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sned1Q70E20 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sned1Q70E20 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sned1Q70E20 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sned1Q70E20 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sned1Q70E20 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sned1Q70E20 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sned1Q70E20 Gm14494-201ENSMUST00000118786 435 ntBASIC20.81■□□□□ 0.92
Sned1Q70E20 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Sned1Q70E20 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sned1Q70E20 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Sned1Q70E20 Gm7230-201ENSMUST00000173026 815 ntBASIC20.81■□□□□ 0.92
Sned1Q70E20 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sned1Q70E20 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC20.81■□□□□ 0.92
Sned1Q70E20 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sned1Q70E20 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sned1Q70E20 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sned1Q70E20 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sned1Q70E20 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Sned1Q70E20 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sned1Q70E20 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sned1Q70E20 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sned1Q70E20 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sned1Q70E20 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sned1Q70E20 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC20.8■□□□□ 0.92
Sned1Q70E20 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sned1Q70E20 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC20.8■□□□□ 0.92
Sned1Q70E20 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC20.8■□□□□ 0.92
Sned1Q70E20 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sned1Q70E20 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Sned1Q70E20 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sned1Q70E20 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sned1Q70E20 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sned1Q70E20 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sned1Q70E20 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Sned1Q70E20 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sned1Q70E20 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sned1Q70E20 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sned1Q70E20 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sned1Q70E20 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.8■□□□□ 0.92
Sned1Q70E20 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sned1Q70E20 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sned1Q70E20 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sned1Q70E20 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sned1Q70E20 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC20.79■□□□□ 0.92
Sned1Q70E20 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC20.79■□□□□ 0.92
Sned1Q70E20 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC20.79■□□□□ 0.92
Sned1Q70E20 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sned1Q70E20 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sned1Q70E20 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sned1Q70E20 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Sned1Q70E20 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Sned1Q70E20 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.79■□□□□ 0.92
Sned1Q70E20 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sned1Q70E20 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Sned1Q70E20 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sned1Q70E20 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC20.78■□□□□ 0.92
Sned1Q70E20 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Sned1Q70E20 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC20.78■□□□□ 0.92
Sned1Q70E20 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Sned1Q70E20 CT009713.7-201ENSMUST00000224689 571 ntBASIC20.78■□□□□ 0.92
Sned1Q70E20 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sned1Q70E20 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.78■□□□□ 0.92
Sned1Q70E20 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sned1Q70E20 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sned1Q70E20 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms