Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 Gm19658-201ENSMUST00000196231 138 ntBASIC20.44■□□□□ 0.86
Nup188Q6ZQH8 Gm44367-201ENSMUST00000196836 138 ntBASIC20.44■□□□□ 0.86
Nup188Q6ZQH8 Gm44350-201ENSMUST00000197197 138 ntBASIC20.44■□□□□ 0.86
Nup188Q6ZQH8 Gm44390-201ENSMUST00000197533 144 ntBASIC20.44■□□□□ 0.86
Nup188Q6ZQH8 Gm44313-201ENSMUST00000198018 138 ntBASIC20.44■□□□□ 0.86
Nup188Q6ZQH8 Gm44486-201ENSMUST00000198508 138 ntBASIC20.44■□□□□ 0.86
Nup188Q6ZQH8 Gm44454-201ENSMUST00000198541 138 ntBASIC20.44■□□□□ 0.86
Nup188Q6ZQH8 Gm44314-201ENSMUST00000199263 138 ntBASIC20.44■□□□□ 0.86
Nup188Q6ZQH8 Gm44394-201ENSMUST00000199558 138 ntBASIC20.44■□□□□ 0.86
Nup188Q6ZQH8 Gm44484-201ENSMUST00000199873 138 ntBASIC20.44■□□□□ 0.86
Nup188Q6ZQH8 Gm44466-201ENSMUST00000200264 138 ntBASIC20.44■□□□□ 0.86
Nup188Q6ZQH8 Gm44359-201ENSMUST00000200671 138 ntBASIC20.44■□□□□ 0.86
Nup188Q6ZQH8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nup188Q6ZQH8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nup188Q6ZQH8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nup188Q6ZQH8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nup188Q6ZQH8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nup188Q6ZQH8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Nup188Q6ZQH8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nup188Q6ZQH8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nup188Q6ZQH8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nup188Q6ZQH8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
Nup188Q6ZQH8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nup188Q6ZQH8 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nup188Q6ZQH8 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nup188Q6ZQH8 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nup188Q6ZQH8 Cmtm5-203ENSMUST00000227441 610 ntBASIC20.44■□□□□ 0.86
Nup188Q6ZQH8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nup188Q6ZQH8 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nup188Q6ZQH8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup188Q6ZQH8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup188Q6ZQH8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup188Q6ZQH8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup188Q6ZQH8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Nup188Q6ZQH8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup188Q6ZQH8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup188Q6ZQH8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup188Q6ZQH8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup188Q6ZQH8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC20.43■□□□□ 0.86
Nup188Q6ZQH8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup188Q6ZQH8 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup188Q6ZQH8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nup188Q6ZQH8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nup188Q6ZQH8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC20.43■□□□□ 0.86
Nup188Q6ZQH8 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup188Q6ZQH8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup188Q6ZQH8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup188Q6ZQH8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup188Q6ZQH8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup188Q6ZQH8 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.42■□□□□ 0.86
Nup188Q6ZQH8 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup188Q6ZQH8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC20.42■□□□□ 0.86
Nup188Q6ZQH8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup188Q6ZQH8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup188Q6ZQH8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup188Q6ZQH8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup188Q6ZQH8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nup188Q6ZQH8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup188Q6ZQH8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup188Q6ZQH8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nup188Q6ZQH8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.41■□□□□ 0.86
Nup188Q6ZQH8 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup188Q6ZQH8 Rprl3-201ENSMUST00000157400 290 ntBASIC20.41■□□□□ 0.86
Nup188Q6ZQH8 AC161829.1-201ENSMUST00000220298 281 ntBASIC20.41■□□□□ 0.86
Nup188Q6ZQH8 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup188Q6ZQH8 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup188Q6ZQH8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup188Q6ZQH8 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Nup188Q6ZQH8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup188Q6ZQH8 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup188Q6ZQH8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup188Q6ZQH8 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup188Q6ZQH8 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC20.41■□□□□ 0.86
Nup188Q6ZQH8 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nup188Q6ZQH8 AC138767.1-201ENSMUST00000222661 415 ntBASIC20.41■□□□□ 0.86
Nup188Q6ZQH8 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup188Q6ZQH8 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup188Q6ZQH8 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup188Q6ZQH8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup188Q6ZQH8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup188Q6ZQH8 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC20.4■□□□□ 0.86
Nup188Q6ZQH8 AC153794.1-201ENSMUST00000169148 126 ntBASIC20.4■□□□□ 0.86
Nup188Q6ZQH8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup188Q6ZQH8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup188Q6ZQH8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup188Q6ZQH8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.39■□□□□ 0.86
Nup188Q6ZQH8 Gm10052-201ENSMUST00000168019 960 ntBASIC20.39■□□□□ 0.86
Nup188Q6ZQH8 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC20.39■□□□□ 0.86
Nup188Q6ZQH8 Vti1a-206ENSMUST00000225529 1244 ntBASIC20.39■□□□□ 0.86
Nup188Q6ZQH8 Gm7729-201ENSMUST00000050143 801 ntBASIC20.39■□□□□ 0.86
Nup188Q6ZQH8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nup188Q6ZQH8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC20.39■□□□□ 0.86
Nup188Q6ZQH8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Nup188Q6ZQH8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.39■□□□□ 0.85
Nup188Q6ZQH8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nup188Q6ZQH8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nup188Q6ZQH8 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC20.39■□□□□ 0.85
Nup188Q6ZQH8 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC20.39■□□□□ 0.85
Nup188Q6ZQH8 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC20.39■□□□□ 0.85
Nup188Q6ZQH8 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms