Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx58Q6Q899 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx58Q6Q899 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx58Q6Q899 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx58Q6Q899 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx58Q6Q899 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC21.3■■□□□ 1
Ddx58Q6Q899 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx58Q6Q899 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Ddx58Q6Q899 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC21.29■■□□□ 1
Ddx58Q6Q899 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx58Q6Q899 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx58Q6Q899 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx58Q6Q899 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC21.29■■□□□ 1
Ddx58Q6Q899 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ddx58Q6Q899 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ddx58Q6Q899 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx58Q6Q899 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx58Q6Q899 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx58Q6Q899 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx58Q6Q899 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC21.29■■□□□ 1
Ddx58Q6Q899 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx58Q6Q899 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC21.29■■□□□ 1
Ddx58Q6Q899 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx58Q6Q899 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx58Q6Q899 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx58Q6Q899 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx58Q6Q899 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx58Q6Q899 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Ddx58Q6Q899 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx58Q6Q899 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ddx58Q6Q899 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx58Q6Q899 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC21.28■■□□□ 1
Ddx58Q6Q899 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC21.28■■□□□ 1
Ddx58Q6Q899 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ddx58Q6Q899 Gm27000-201ENSMUST00000182943 842 ntBASIC21.28■■□□□ 1
Ddx58Q6Q899 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC21.28■■□□□ 1
Ddx58Q6Q899 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ddx58Q6Q899 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx58Q6Q899 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ddx58Q6Q899 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx58Q6Q899 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx58Q6Q899 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx58Q6Q899 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ddx58Q6Q899 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Ddx58Q6Q899 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC21.27■■□□□ 1
Ddx58Q6Q899 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.27■■□□□ 1
Ddx58Q6Q899 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC21.27■■□□□ 1
Ddx58Q6Q899 Gm10459-201ENSMUST00000202708 1155 ntBASIC21.27■■□□□ 1
Ddx58Q6Q899 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx58Q6Q899 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx58Q6Q899 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
Ddx58Q6Q899 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC21.27■□□□□ 0.99
Ddx58Q6Q899 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Ddx58Q6Q899 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx58Q6Q899 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx58Q6Q899 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx58Q6Q899 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx58Q6Q899 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC21.26■□□□□ 0.99
Ddx58Q6Q899 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx58Q6Q899 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Ddx58Q6Q899 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC21.26■□□□□ 0.99
Ddx58Q6Q899 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx58Q6Q899 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx58Q6Q899 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Ddx58Q6Q899 Gm10819-201ENSMUST00000099988 561 ntBASIC21.26■□□□□ 0.99
Ddx58Q6Q899 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC21.26■□□□□ 0.99
Ddx58Q6Q899 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx58Q6Q899 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx58Q6Q899 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC21.26■□□□□ 0.99
Ddx58Q6Q899 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC21.26■□□□□ 0.99
Ddx58Q6Q899 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Ddx58Q6Q899 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx58Q6Q899 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx58Q6Q899 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx58Q6Q899 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Ddx58Q6Q899 Fam105a-203ENSMUST00000226170 3043 ntBASIC21.26■□□□□ 0.99
Ddx58Q6Q899 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx58Q6Q899 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx58Q6Q899 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx58Q6Q899 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx58Q6Q899 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC21.25■□□□□ 0.99
Ddx58Q6Q899 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC21.25■□□□□ 0.99
Ddx58Q6Q899 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
Ddx58Q6Q899 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx58Q6Q899 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx58Q6Q899 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Ddx58Q6Q899 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx58Q6Q899 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx58Q6Q899 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx58Q6Q899 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx58Q6Q899 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC21.24■□□□□ 0.99
Ddx58Q6Q899 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Ddx58Q6Q899 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx58Q6Q899 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx58Q6Q899 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx58Q6Q899 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Ddx58Q6Q899 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx58Q6Q899 Gm29518-201ENSMUST00000190858 372 ntBASIC21.24■□□□□ 0.99
Ddx58Q6Q899 AC154471.1-201ENSMUST00000224418 436 ntBASIC21.24■□□□□ 0.99
Ddx58Q6Q899 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms