Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Smarcc2Q6PDG5 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smarcc2Q6PDG5 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Smarcc2Q6PDG5 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smarcc2Q6PDG5 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Smarcc2Q6PDG5 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.07■□□□□ 0.8
Smarcc2Q6PDG5 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smarcc2Q6PDG5 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smarcc2Q6PDG5 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smarcc2Q6PDG5 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Smarcc2Q6PDG5 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Smarcc2Q6PDG5 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.07■□□□□ 0.8
Smarcc2Q6PDG5 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.07■□□□□ 0.8
Smarcc2Q6PDG5 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.07■□□□□ 0.8
Smarcc2Q6PDG5 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.07■□□□□ 0.8
Smarcc2Q6PDG5 Gm4974-201ENSMUST00000209974 875 ntBASIC20.07■□□□□ 0.8
Smarcc2Q6PDG5 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Smarcc2Q6PDG5 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smarcc2Q6PDG5 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Smarcc2Q6PDG5 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smarcc2Q6PDG5 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smarcc2Q6PDG5 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Smarcc2Q6PDG5 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcc2Q6PDG5 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcc2Q6PDG5 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Smarcc2Q6PDG5 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcc2Q6PDG5 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.06■□□□□ 0.8
Smarcc2Q6PDG5 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcc2Q6PDG5 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcc2Q6PDG5 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcc2Q6PDG5 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcc2Q6PDG5 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcc2Q6PDG5 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcc2Q6PDG5 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcc2Q6PDG5 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcc2Q6PDG5 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcc2Q6PDG5 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcc2Q6PDG5 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Smarcc2Q6PDG5 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Smarcc2Q6PDG5 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Smarcc2Q6PDG5 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcc2Q6PDG5 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcc2Q6PDG5 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcc2Q6PDG5 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcc2Q6PDG5 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcc2Q6PDG5 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.05■□□□□ 0.8
Smarcc2Q6PDG5 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.05■□□□□ 0.8
Smarcc2Q6PDG5 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.05■□□□□ 0.8
Smarcc2Q6PDG5 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.05■□□□□ 0.8
Smarcc2Q6PDG5 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcc2Q6PDG5 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcc2Q6PDG5 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.05■□□□□ 0.8
Smarcc2Q6PDG5 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.05■□□□□ 0.8
Smarcc2Q6PDG5 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Smarcc2Q6PDG5 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcc2Q6PDG5 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcc2Q6PDG5 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcc2Q6PDG5 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcc2Q6PDG5 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcc2Q6PDG5 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcc2Q6PDG5 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.04■□□□□ 0.8
Smarcc2Q6PDG5 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.04■□□□□ 0.8
Smarcc2Q6PDG5 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcc2Q6PDG5 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcc2Q6PDG5 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.04■□□□□ 0.8
Smarcc2Q6PDG5 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.04■□□□□ 0.8
Smarcc2Q6PDG5 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Smarcc2Q6PDG5 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.04■□□□□ 0.8
Smarcc2Q6PDG5 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Smarcc2Q6PDG5 Mir7071-201ENSMUST00000184847 69 ntBASIC20.04■□□□□ 0.8
Smarcc2Q6PDG5 Gm10517-202ENSMUST00000192970 758 ntBASIC20.04■□□□□ 0.8
Smarcc2Q6PDG5 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.04■□□□□ 0.8
Smarcc2Q6PDG5 Gm5417-201ENSMUST00000079706 384 ntBASIC20.04■□□□□ 0.8
Smarcc2Q6PDG5 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcc2Q6PDG5 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcc2Q6PDG5 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcc2Q6PDG5 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcc2Q6PDG5 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcc2Q6PDG5 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcc2Q6PDG5 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Smarcc2Q6PDG5 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcc2Q6PDG5 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcc2Q6PDG5 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcc2Q6PDG5 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Smarcc2Q6PDG5 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcc2Q6PDG5 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.03■□□□□ 0.8
Smarcc2Q6PDG5 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcc2Q6PDG5 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcc2Q6PDG5 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Smarcc2Q6PDG5 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Smarcc2Q6PDG5 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcc2Q6PDG5 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcc2Q6PDG5 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcc2Q6PDG5 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcc2Q6PDG5 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcc2Q6PDG5 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcc2Q6PDG5 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcc2Q6PDG5 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcc2Q6PDG5 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.02■□□□□ 0.8
Smarcc2Q6PDG5 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms