Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.02■□□□□ 0.64
Herc4Q6PAV2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Herc4Q6PAV2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Herc4Q6PAV2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Herc4Q6PAV2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Herc4Q6PAV2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Herc4Q6PAV2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Herc4Q6PAV2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Herc4Q6PAV2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Herc4Q6PAV2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Herc4Q6PAV2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Herc4Q6PAV2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Herc4Q6PAV2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Herc4Q6PAV2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Herc4Q6PAV2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Herc4Q6PAV2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Herc4Q6PAV2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.01■□□□□ 0.63
Herc4Q6PAV2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Herc4Q6PAV2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Herc4Q6PAV2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Herc4Q6PAV2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Herc4Q6PAV2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.01■□□□□ 0.63
Herc4Q6PAV2 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Herc4Q6PAV2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Herc4Q6PAV2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Herc4Q6PAV2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Herc4Q6PAV2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19■□□□□ 0.63
Herc4Q6PAV2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Herc4Q6PAV2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Herc4Q6PAV2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Herc4Q6PAV2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19■□□□□ 0.63
Herc4Q6PAV2 Gm13181-201ENSMUST00000120117 1069 ntBASIC19■□□□□ 0.63
Herc4Q6PAV2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19■□□□□ 0.63
Herc4Q6PAV2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Herc4Q6PAV2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19■□□□□ 0.63
Herc4Q6PAV2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Herc4Q6PAV2 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Herc4Q6PAV2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Herc4Q6PAV2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Herc4Q6PAV2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Herc4Q6PAV2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Herc4Q6PAV2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Herc4Q6PAV2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Herc4Q6PAV2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Herc4Q6PAV2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Herc4Q6PAV2 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Herc4Q6PAV2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Herc4Q6PAV2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.99■□□□□ 0.63
Herc4Q6PAV2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Herc4Q6PAV2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Herc4Q6PAV2 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Herc4Q6PAV2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Herc4Q6PAV2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Herc4Q6PAV2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Herc4Q6PAV2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Herc4Q6PAV2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Herc4Q6PAV2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.99■□□□□ 0.63
Herc4Q6PAV2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Herc4Q6PAV2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Herc4Q6PAV2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Herc4Q6PAV2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.99■□□□□ 0.63
Herc4Q6PAV2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Herc4Q6PAV2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Herc4Q6PAV2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Herc4Q6PAV2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Herc4Q6PAV2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Herc4Q6PAV2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Herc4Q6PAV2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Herc4Q6PAV2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Herc4Q6PAV2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Herc4Q6PAV2 Timm23-208ENSMUST00000226683 750 ntBASIC18.98■□□□□ 0.63
Herc4Q6PAV2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Herc4Q6PAV2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Herc4Q6PAV2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Herc4Q6PAV2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Herc4Q6PAV2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Herc4Q6PAV2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Herc4Q6PAV2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Herc4Q6PAV2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.98■□□□□ 0.63
Herc4Q6PAV2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Herc4Q6PAV2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Herc4Q6PAV2 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.97■□□□□ 0.63
Herc4Q6PAV2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Herc4Q6PAV2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Herc4Q6PAV2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Herc4Q6PAV2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.97■□□□□ 0.63
Herc4Q6PAV2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.97■□□□□ 0.63
Herc4Q6PAV2 Gm38027-201ENSMUST00000192315 235 ntBASIC18.97■□□□□ 0.63
Herc4Q6PAV2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.97■□□□□ 0.63
Herc4Q6PAV2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Herc4Q6PAV2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Herc4Q6PAV2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Herc4Q6PAV2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Herc4Q6PAV2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Herc4Q6PAV2 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Herc4Q6PAV2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.97■□□□□ 0.63
Herc4Q6PAV2 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Herc4Q6PAV2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Herc4Q6PAV2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Herc4Q6PAV2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms